Candidatus Pantoea carbekii: HHS_04120
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Entry
HHS_04120 CDS
T02865
Symbol
glyA1
Name
(GenBank) GlyA1 protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hhs
Candidatus Pantoea carbekii
Pathway
hhs00260
Glycine, serine and threonine metabolism
hhs00630
Glyoxylate and dicarboxylate metabolism
hhs00670
One carbon pool by folate
hhs00680
Methane metabolism
hhs01100
Metabolic pathways
hhs01110
Biosynthesis of secondary metabolites
hhs01120
Microbial metabolism in diverse environments
hhs01200
Carbon metabolism
hhs01230
Biosynthesis of amino acids
hhs01240
Biosynthesis of cofactors
hhs04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HHS_04120 (glyA1)
09102 Energy metabolism
00680 Methane metabolism
HHS_04120 (glyA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HHS_04120 (glyA1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HHS_04120 (glyA1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HHS_04120 (glyA1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HHS_04120 (glyA1)
Enzymes [BR:
hhs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HHS_04120 (glyA1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
OKR_DC_1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BAO00382
UniProt:
U3U7J6
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All DBs
Position
complement(555446..556699)
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AA seq
417 aa
AA seq
DB search
MLKHETNIADYDIELWKAMQQETVRQEKHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GRRYYGGCKYIDIIEELAIERAKMLFNADYANVQPHSGSQANFAVYTALLKPGDTIIGMK
LSHGGHLTHGSSVNLSGKMYNFIFYGIDKTGQINYDELTELTQIHRPKMIVGGFSAYSGL
CNWAKMREIADSIGAYLLVDIAHVAGLIAADLYPSPISYAHVVTSTTHKTLAGPRGGLIL
AKNGNEEFYKQLNSAVFPGSQGGPLMHVIAGKAVALKEAMEPNFKNYQLQTIKNAKAMVK
VFIAHDYNVICGETYNHMFLINLINKKLTGRQADITLSRTNITINKNSIPNDPETPFITS
GIRLGTPAVTRRGFKETEVCELAIWISDVLNNINNEKVITKTKQKVLDICASFPVYN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaacatgaaacaaatattgctgattatgatatagagttatggaaagcaatgcag
caagaaacagtgcgtcaggaaaaacatatcgaattaattgcttcagaaaattataccagc
ccacgtgttatggaagcacaaggttcacaactgacgaataaatatgcagaaggttatcct
ggcagacgatattatgggggatgcaagtatatagatattattgaagaactagctattgaa
cgagcaaaaatgctcttcaatgcagattatgcaaacgtacaaccacattctggttctcaa
gctaactttgccgtctatactgctttattaaaaccaggtgatactattattggcatgaaa
ttatcgcatggtggtcatctaacccatggttcatcagttaacctatctggtaaaatgtat
aattttatattctacggaatagataaaactggacaaattaattatgatgaattaactgaa
ttaacacaaattcatcgaccaaaaatgatcgttggcggtttttctgcttattctggttta
tgtaattgggctaaaatgcgcgaaattgctgatagtataggtgcctacctcttagttgat
atagcccatgttgcaggtctaattgctgcagatctatatccaagcccaatatcatatgca
cacgttgtaacgtcaacaacccataaaactttagccggtcctcgcggtggactaattttg
gcaaaaaatggcaatgaagaattttataaacaacttaattctgcggtatttccaggcagt
caaggtggtcctctaatgcatgttattgctggtaaagcagttgcacttaaagaagcaatg
gaaccgaattttaaaaattatcaattacaaactataaaaaacgctaaagcaatggtaaaa
gtatttattgcacacgattacaatgttatttgtggtgaaacttataatcatatgtttcta
attaatcttataaacaaaaagttgactggaagacaagctgatatcacactaagtcgtact
aatataacgataaacaaaaatagcataccgaatgaccctgaaacaccatttattacttct
ggtatacggcttggtacgcctgcagttacgcgtcgtggttttaaagaaacagaagtgtgt
gaattagctatatggatttctgatgtgttgaataatattaataatgaaaaagtgatcaca
aaaactaaacaaaaagttcttgatatctgtgcaagtttccctgtatataattaa
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