Candidatus Pantoea carbekii: HHS_04540
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Entry
HHS_04540 CDS
T02865
Symbol
mrcB
Name
(GenBank) MrcB protein
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
hhs
Candidatus Pantoea carbekii
Pathway
hhs00550
Peptidoglycan biosynthesis
hhs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HHS_04540 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hhs01003
]
HHS_04540 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hhs01011
]
HHS_04540 (mrcB)
Enzymes [BR:
hhs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
HHS_04540 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HHS_04540 (mrcB)
Glycosyltransferases [BR:
hhs01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
HHS_04540 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
hhs01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
HHS_04540 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
BAO00424
UniProt:
U3U7X4
LinkDB
All DBs
Position
complement(611323..613563)
Genome browser
AA seq
746 aa
AA seq
DB search
MIINWGIHLNSEIRNRLNSEIWQSPAIIYSRMVSLEPGMLYQKKDLITLLESTHYRNVSH
IMHSGEFSVKGDTIFILRRPFNFPDNKEGKIYVRITFNTNHDKLIEIKNVRTGRNFAFFR
LDPCLINMLQSSNGKQRFFVPKTGFPDLLINTLINTEDRRFYQHDGISPHSIGRAFLANI
IAGRAIQGGSTLTQQLVKNLFLTNERSIWRKIREVYMAIIMDASYSKDYILELYLNEVYL
GQVGNIQIRGFPLASLCYFNRSLNELSLDQQAMLVGMVKGASLYNPWRNLKISLQRRNLV
LYVLQQHKVIDKNLYTMLSTRPLKVQPKDRAIIAQPAFMQILRNELKIKLGRDKMKDLSS
MKIFTTLDPISQHAAEKAVREGIPILKKQYILKDLESAMVIVDRFSGELRAIVGGSNPQF
AGYNRATQARRSIGSLAKPATYLTALSQPDIYRLNSLISNQPITMKQPNGTLWKPMNNNH
LFSNKVMLVDALINSMNIPTINLGMTLGLDVIIDHWIKLGIPKDQLHPVPAILLGSLNLT
PIEVAQAFQSIASGGNRAKLSVIRSVIDKNGDVLYQSFPQSKRVEPEQAVYLTLYAMQEV
INHGTARALGARYPNAHLAGKTGTTNDLVDSWFAGIDGKEVAITWVGRDNNQTAKLYGAN
GAMQIYRRYLDNQPPMPLILKPPQGITYMHINSSGNFVCNQNTLRTLPVWILDPKQICQK
QKKNQKDTKKYDHNITDWIKEMFYNS
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgatcattaactggggtatccatcttaattctgaaattcgtaatcgtctaaatagcgaa
atatggcaatcaccagctattatttatagtcgtatggtcagtttagaaccaggaatgcta
tatcaaaagaaagatttgattactctactagaaagtacacattatcgtaacgtatcgcat
attatgcattctggcgaatttagtgtaaaaggtgacactatttttatactacgtcgtcca
tttaattttcctgacaataaagaaggaaaaatatacgtacgtatcacgttcaatactaat
catgacaaactaatagagattaaaaatgttagaacagggcgaaattttgctttctttcgt
cttgatccttgcttaattaacatgctgcaatcatcaaatggaaaacaacggttttttgtt
cctaaaacgggttttccagatttattaataaacacattaattaatacagaagatcgtcgt
ttttaccaacatgatggcatcagtcctcattctatcgggcgtgcttttcttgctaatatt
attgcaggacgtgcgatacaaggtggtagcacattaacacagcagctagtcaagaatctc
tttctgactaatgagcgttctatatggcgtaaaatacgtgaagtttatatggcaattata
atggatgcaagttacagcaaagattatatattagaactatatctaaatgaagtctatctt
ggtcaggtgggtaatattcagatacgaggttttccattagcaagtttgtgctattttaat
cgttcgttaaatgaattaagtcttgatcagcaggcaatgttagtaggaatggtaaagggt
gcatcgttgtataatccttggcgtaatttaaaaatttctttgcaacgtcgtaatttagtt
ttatatgttttacaacagcacaaagtgatagataaaaatctatacacaatgctctcaact
cgtccactaaaagttcaaccgaaagatagagcaattattgctcaacccgcatttatgcaa
atcttacgtaatgaattgaaaattaaacttggccgtgacaagatgaaagatctttcttct
atgaagatttttactacgcttgatcccatctcgcagcatgccgcagaaaaagctgtaaga
gaaggtattcctattcttaaaaagcaatatatcttaaaagatttagaatcagcaatggta
atagttgaccgatttagtggtgagttaagagcgatagtaggtggttctaatccacaattt
gccggttataaccgtgcaacacaggcccgtcgttctattggctcactagctaaaccagca
acctatctcacggcattaagtcaaccagatatttatcgccttaatagtttaatttcaaat
caaccaattactatgaagcaacctaatggtactctctggaaaccgatgaacaataatcat
ctttttagtaataaagtaatgttggtagatgcattaatcaattcaatgaatatacctaca
ataaatcttggcatgacattaggtttggatgtcattatagatcattggataaaacttggt
ataccaaaagatcaattacatcctgtgcccgcaattttgttaggttcgcttaacttaaca
cctattgaagtggcacaagcgtttcaatcaattgccagtggtggtaatcgtgcaaaatta
tcggtaattcgttcagtaattgataagaatggtgatgtattatatcaaagtttcccacag
tccaaaagggtagaacctgaacaggcagtatatttgacgttatatgccatgcaagaggtc
ataaatcatggcactgcacgtgcattaggagcgcgttatccaaatgcccatttagctgga
aaaactggtacaactaatgatttagttgatagttggtttgctggtattgatggtaaagaa
gtagctatcacttgggttggtcgcgataataaccaaactgcaaagctatatggtgccaat
ggagcaatgcagatttaccgtcgttatcttgataaccagcctccaatgccgttgatatta
aaacctccgcaaggtatcacttatatgcatattaattcttcaggtaattttgtatgtaat
caaaataccttacgcacattgcctgtatggatattagatccaaaacaaatatgtcaaaaa
caaaaaaaaaatcaaaaggatactaaaaagtacgatcataacataaccgattggattaaa
gaaatgttttacaattcataa
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