Candidatus Pantoea carbekii: HHS_04780
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Entry
HHS_04780 CDS
T02865
Symbol
murD
Name
(GenBank) MurD protein
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
hhs
Candidatus Pantoea carbekii
Pathway
hhs00470
D-Amino acid metabolism
hhs00550
Peptidoglycan biosynthesis
hhs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HHS_04780 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HHS_04780 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hhs01011
]
HHS_04780 (murD)
Enzymes [BR:
hhs01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HHS_04780 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hhs01011
]
Precursor biosynthesis
Amino acid ligase
HHS_04780 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
THF_DHG_CYH_C
QRPTase_C
Motif
Other DBs
NCBI-ProteinID:
BAO00448
UniProt:
U3U9F3
LinkDB
All DBs
Position
complement(646261..647586)
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AA seq
441 aa
AA seq
DB search
MADYKGKKVVIIGMGLTGLSCVDFFLAKGVIPRIMDTRMSPPGLKKLPKNIEFYCGGINR
RWLLTSDLVIVSPGIALIDPIFQEINQSGIELIGDIELFCREVNAPIVAITGSNGKSTVT
MLLSEMARAANWSVSVGGNIGLPILKLLEFNSVSNLYVLELSSFQLQTTYSLKPMVATIL
NIQEDHMDRYSQDLQQYRSAKLRIYKHAEVCIFNANDNMTIPTNSINKSYISFGINTGDY
CLTQQGENIWLQIKGKKVINTKKLKLIGYHNYVNALAALALADAASIPRTFSLSALANFS
GLPHRFQLVHQANGVRWINDSKATNVSSTHAALKALRIKKGVLWLLLGGEGKGTDFKSLK
EYLQVEYLRLFCFGIDGHILAQLRPEITTLTETLQQAMEQVALQVKSGDIVLLSPACASF
DQFQNFEQRGDIFTKLAKELG
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggctgattataaaggcaaaaaagttgttattattggaatggggttaacaggtctttca
tgtgttgatttttttttagctaaaggtgtgataccacgcattatggacactcgtatgtca
ccgccgggtttgaaaaaattgccgaaaaatatagaattttattgcggtggaatcaataga
cgttggttgctaacaagcgatctagttattgtgagtcctggaattgcgttgattgatcca
atatttcaagaaattaatcaatcaggtatcgagttaataggtgatattgaattattttgt
cgtgaagtaaacgcaccgattgttgcaattactggttctaatggaaaaagcactgttacg
atgctattaagcgaaatggcacgagctgcaaattggtcggtgagcgtaggtggaaacatt
ggattacctattttaaaattattagaatttaattctgtatcaaacctttatgtattagaa
ctttccagttttcaactacaaacaacttatagtttaaaacctatggtagcaactatatta
aatattcaagaagatcatatggatcgatattcacaagatttacaacaatatcgttctgct
aagctacgcatttataaacatgctgaagtatgtatttttaatgctaacgataatatgact
ataccaacaaatagtatcaataagtcttacatcagtttcggtatcaatactggagattat
tgcctgacacagcaaggagaaaacatctggctacagataaaaggcaaaaaagttattaat
actaaaaaattaaaattaataggctatcataactatgttaatgccctagccgcattggcg
ttagcggatgctgcttctattccacgtacttttagtctatcagcgttagctaatttttct
ggtttaccacatcgttttcaattagtacaccaagctaatggtgttcgttggattaacgat
tctaaagccaccaatgttagtagtactcacgctgctttaaaagcattacgtataaagaag
ggtgtattatggcttctattaggtggagaaggaaaaggaacggattttaaatcattaaaa
gaatatttacaggtagaatatttaagattattttgctttggcattgatggtcatatatta
gctcagttgaggccagaaattactacacttactgaaacgcttcaacaagctatggaacaa
gtagcgttgcaagtaaaatccggagacatagttttgttatcaccagcttgtgctagcttc
gatcaattccaaaatttcgaacaaagaggggatatatttacaaaactagcaaaggagtta
ggttaa
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