KEGG   Candidatus Pantoea carbekii: HHS_05180
Entry
HHS_05180         CDS       T02865                                 
Name
(GenBank) hypothetical protein
  KO
K02344  DNA polymerase III subunit psi [EC:2.7.7.7]
Organism
hhs  Candidatus Pantoea carbekii
Pathway
hhs03030  DNA replication
hhs03430  Mismatch repair
hhs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hhs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HHS_05180
   03430 Mismatch repair
    HHS_05180
   03440 Homologous recombination
    HHS_05180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hhs03032]
    HHS_05180
   03400 DNA repair and recombination proteins [BR:hhs03400]
    HHS_05180
Enzymes [BR:hhs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HHS_05180
DNA replication proteins [BR:hhs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HHS_05180
DNA repair and recombination proteins [BR:hhs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HHS_05180
SSDB
Motif
Pfam: DNA_III_psi
Other DBs
NCBI-ProteinID: BAO00488
UniProt: U3U9H8
LinkDB
Position
complement(704714..705118)
AA seq 134 aa
MNSRRYWIIQQTGITQYQLRFPCLLKNNNTIYLIPSAQLILVTEHILILEEPLVKDVLQA
LNFQNKDVIVLLPNQLVMLPVKVNCCAWLLGFESDHCFNGIKFTTASFNVFSNSSKQKRD
LWKQICNYLNNNLK
NT seq 405 nt   +upstreamnt  +downstreamnt
atgaattcaagacgctattggattatacagcaaacaggaattacacaataccagctacga
tttccgtgtttactgaaaaataataatacaatatacttaattccttctgctcaacttatt
ttagtgactgagcatattttaatattagaagaaccgttagttaaagatgtattacaagca
ctgaattttcaaaataaagatgtaattgtgttattgccaaatcaattagtcatgttaccg
gtgaaagtcaattgttgtgcttggttgctaggatttgaaagtgatcattgcttcaatggt
attaaatttaccacagcttcttttaatgttttttcaaacagtagtaagcagaaacgcgat
ctatggaagcaaatatgtaattatctaaataacaatttgaaataa

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