Candidatus Pantoea carbekii: HHS_05610
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Entry
HHS_05610 CDS
T02865
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
hhs
Candidatus Pantoea carbekii
Pathway
hhs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HHS_05610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhs03400
]
HHS_05610
Enzymes [BR:
hhs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
HHS_05610
DNA repair and recombination proteins [BR:
hhs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HHS_05610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
SspO
Motif
Other DBs
NCBI-ProteinID:
BAO00531
UniProt:
U3U301
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All DBs
Position
769218..770063
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AA seq
281 aa
AA seq
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MKYIGAHVSILGGVDKAVIRAHDIKATAFALFTKNQRQWHATQLSEKIIHAFKNACKKYG
FSSSQILPHISFLINLGHPDKQVLEKSRAAFLNEMQRAEQLGLTLLNFHPGSHLQKIDQQ
TCLKRISESINIVLNKTNHVTAVIENTAGQGSNIGFRFEHLAKIIENVEDQSRIGVCIDT
CHTFASGYDLRTEQDCIKTFSEFNEIIDFKYLRGMHLNDTKSTLGGRIDRHHSLGQGNIG
KIAFNWIMKNPRFDNIPLILETINPCIWTNEIKWLKSQCLN
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatattggtgcacatgttagtattttagggggagtagacaaagcagtaatccgt
gctcatgatattaaagctactgcatttgcactgtttactaaaaatcaacgacaatggcat
gcaactcagctatcagaaaagataattcatgcttttaaaaatgcctgtaaaaaatatggt
tttagttcttcacaaattttacctcatatcagctttttaattaacttagggcatccagat
aagcaagtactagagaaatcgcgcgctgcatttcttaatgaaatgcagcgcgctgaacaa
ctaggtctaacattattgaatttccatccaggtagtcatttacaaaaaattgatcaacaa
acatgtcttaaacgtatttcagaatctattaatatcgttttgaacaaaactaatcatgtt
actgctgtaattgaaaacacagcaggtcagggcagtaatataggatttcgattcgaacat
cttgcaaaaattattgaaaatgtagaagatcaatcacgcattggagtatgtattgatact
tgtcatacctttgcgagcggttatgatctacgcactgaacaagattgtattaaaactttt
agtgaattcaatgagataatagattttaaatatttgcgaggtatgcatttaaatgataca
aaaagcacattaggcggtcgtatagaccgacatcatagtctaggtcaaggtaatataggt
aaaattgcttttaattggattatgaaaaatccacgttttgataatatacctcttatactt
gaaactattaatccttgtatttggacaaatgaaattaagtggttaaaatcgcagtgctta
aactaa
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