Candidatus Pantoea carbekii: HHS_06600
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Entry
HHS_06600 CDS
T02865
Symbol
ihfA
Name
(GenBank) integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
hhs
Candidatus Pantoea carbekii
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhs03032
]
HHS_06600 (ihfA)
03036 Chromosome and associated proteins [BR:
hhs03036
]
HHS_06600 (ihfA)
03400 DNA repair and recombination proteins [BR:
hhs03400
]
HHS_06600 (ihfA)
DNA replication proteins [BR:
hhs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HHS_06600 (ihfA)
Chromosome and associated proteins [BR:
hhs03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
HHS_06600 (ihfA)
DNA repair and recombination proteins [BR:
hhs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
HHS_06600 (ihfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
BAO00630
UniProt:
U3U6Q1
LinkDB
All DBs
Position
complement(922516..922821)
Genome browser
AA seq
101 aa
AA seq
DB search
MALTKAEMSEYLFEKLGLSKRDAKELVELFFEEVRRALENGEQVKLSGFGNFELRDKNQR
PGRNPKTGEDIPITARRVVTFRPGQKLKSRVDNKPSNKKAN
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttactaaagctgaaatgtcagagtacctgtttgaaaaactcgggttgagcaaa
cgcgatgccaaagagttggtagaacttttttttgaagaggttcgccgcgcattggaaaac
ggagaacaagtaaaattgtctggatttggtaattttgaattacgtgataaaaaccaacgt
ccaggtcgtaatccaaagacaggagaagatattccaataactgctcgccgggtggtaaca
ttccgaccagggcaaaaattgaaaagtcgcgttgataataaaccatctaataaaaaagct
aattaa
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