Candidatus Pantoea carbekii: HHS_06700
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Entry
HHS_06700 CDS
T02865
Symbol
trmU
Name
(GenBank) tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
hhs
Candidatus Pantoea carbekii
Pathway
hhs04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
HHS_06700 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhs03016
]
HHS_06700 (trmU)
Enzymes [BR:
hhs01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
HHS_06700 (trmU)
Transfer RNA biogenesis [BR:
hhs03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
HHS_06700 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
QueC
Asn_synthase
ATP_bind_3
Arginosuc_synth
DUF7411
Diphthami_syn_2
Motif
Other DBs
NCBI-ProteinID:
BAO00640
UniProt:
U3U6R6
LinkDB
All DBs
Position
935991..937103
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AA seq
370 aa
AA seq
DB search
MQDNGSKKKVIVAMSGGVDSSVAAWLMQEQGYQVEGLFMKNWEEEDNDAYCTSARDLEDA
QQVCDQLAIKLHKINFSAEYWDNVFKYFLEEHKAGRTPNPDILCNKEIKFKHFLEFARHD
LSADLIATGHHVRRRDINGKKFLLRGRDDNKDQSYFLYTLSYEQIAQSLFPIGEFTKTEV
RKIAENLNLVTAKKKDSTGICFIGKRKFRKFLALYFPIQPGIIEDVNGKIVGEHQGLMFY
TLGQRKGLGIGGKRESNQYPWYVVDKNLKKNCLIVAQGINHPRLMSIGLIARKIHWMNRE
FIKIPQCCTIKTRYRQTDIPCKIMLLKDSITVHFDNPIAAVTPGQSAVFYLNEVCLGGGI
IEKRLPLLKN
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacaacggcagcaaaaaaaaagtcattgtggccatgtccggtggagttgattct
tcagttgcagcttggcttatgcaagagcagggttatcaagttgaagggttatttatgaaa
aattgggaggaagaagacaatgatgcatattgtacttccgcccgagacttagaagatgca
caacaagtatgtgatcaacttgctataaagctgcataaaattaatttttcggccgaatat
tgggataatgtttttaaatattttcttgaagaacataaagcaggtcgtacaccaaatcca
gacattttatgtaataaagaaatcaaatttaaacattttcttgaatttgctaggcatgat
cttagtgcagatctgattgctacaggtcatcatgtgcgccgtcgggatataaatggtaaa
aaatttttgctacgtggacgcgatgataataaagatcaaagttattttctttatacttta
agttatgagcaaattgcacaaagtcttttccccatcggtgaatttacaaaaacagaagtg
cgtaagattgctgagaatcttaatttggtcactgcaaagaaaaaagattctaccggcatt
tgttttattggtaaaagaaaattccgtaaatttcttgctttgtattttcctattcaacca
ggtattattgaagacgttaatggaaaaatcgtcggtgaacatcaaggcctaatgttttat
acgttaggtcaacgtaagggattaggtattggaggaaaaagagaaagcaatcagtatccg
tggtatgtggttgataaaaatttaaaaaaaaattgtctcattgtagcacaaggcatcaat
catcctcgcctaatgtcaataggtctcattgcacgaaaaattcattggatgaatcgtgaa
tttattaaaatacctcaatgttgcacaataaaaacacgataccgtcagactgatattcca
tgtaaaattatgctattaaaagatagtattacagtgcattttgataatcctattgcagcg
gttacaccaggacaatctgctgttttttaccttaatgaagtttgtttgggtggtggcatt
atcgaaaaacgcctacctttattaaaaaattaa
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