Candidatus Pantoea carbekii: HHS_07060
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Entry
HHS_07060 CDS
T02865
Symbol
ompA
Name
(GenBank) OmpA protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
hhs
Candidatus Pantoea carbekii
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhs02000
]
HHS_07060 (ompA)
Transporters [BR:
hhs02000
]
Other transporters
Pores ion channels [TC:
1
]
HHS_07060 (ompA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
DUF2490
Porin_2
DUF6807
Motif
Other DBs
NCBI-ProteinID:
BAO00676
UniProt:
U3U3E3
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All DBs
Position
982247..983320
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AA seq
357 aa
AA seq
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MKKTAIAMAVVLAGFATVVQATPRDNTWYNGVAMGWSNYHDINFYGNHYRPNQGPSTKCH
PGLRGFLGYQANPHLGFELGYDWLGRMANKGVIVNGSFKAHGLQLTTKLSRRISPHADLY
ARLGFMLWTADAMQHHSYMEFVNNRDNGIAPLAAIGVEYAITKNFATRLDYQWVNNIGDA
YTIGMRPDNGLLSIGVSYRFFQNQPTRPAVSPTIISSTPVVKTERFTLKSDVLFDFNSAT
LKLQGQQILDKLYQELKSMDTKDDSVVVLGFTDRMGSKKYNQKLSEQRAHSVIEYLVLKG
IPTDKISVHGMGKSNPVTGNTCNNVKGHKALINCLAPDRRVEIKIKGFKQVITKTQV
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacagctatcgcaatggcagtggtattggctggtttcgctacggtagtgcag
gccacccctagagataatacctggtataatggtgttgcaatgggctggtctaattaccat
gatattaatttttatggtaaccattaccgcccaaaccaaggtccaagcaccaaatgtcat
cctggactacgtggatttttaggttaccaagctaacccacatcttggatttgaattaggc
tatgattggttaggtcgtatggcaaataaaggagttatagttaacggctcatttaaagca
catggtttacagctaacaactaaattaagccgtcgaattagtcctcatgcggatttatat
gctcgtttaggctttatgctatggactgctgatgctatgcaacaccattcatatatggag
tttgttaacaatcgtgataatggaattgctccattagctgctattggcgttgaatacgca
attactaaaaatttcgctactcgcttagattaccaatgggttaacaatataggtgatgct
tatactatcggtatgcgtcctgacaatggtctattaagtattggtgtttcgtaccgtttc
tttcaaaatcaacctacgcgaccagctgtttcacccactattatatcatcgaccccggtt
gttaaaactgagcgttttactttgaagtctgatgttttatttgatttcaatagtgctacc
ttgaaattacaaggtcaacaaattctggataaactgtatcaagaattaaaatctatggat
accaaggatgactccgttgtcgttttgggttttaccgatcgtatgggttccaaaaaatat
aatcaaaaattatccgaacaacgtgcacattctgttatcgaataccttgttttaaaagga
attccaactgacaaaatttctgtgcatggtatgggaaaatctaatccagtcactggcaat
acttgtaataatgtgaaaggacataaggcattaatcaattgtctagcaccggatcgtcgc
gttgaaataaaaataaagggttttaaacaagtgatcactaaaacacaagtttaa
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