Candidatus Pantoea carbekii: HHS_07180
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Entry
HHS_07180 CDS
T02865
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hhs
Candidatus Pantoea carbekii
Pathway
hhs03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HHS_07180 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hhs03011
]
HHS_07180 (rpsA)
Ribosome [BR:
hhs03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HHS_07180 (rpsA)
Bacteria
HHS_07180 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
DUF2097
Motif
Other DBs
NCBI-ProteinID:
BAO00688
UniProt:
U3U9S5
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All DBs
Position
complement(997299..998978)
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AA seq
559 aa
AA seq
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MNESFAQLFEESLQQIETRPGSIVRGVVIAIDKDFVLVDAGLKSESSISIEQFKNAAGQL
EIKIGDEVDVALEAVEDGFGETLLSREKAKRHEAWIILEKAYQSTETVIGIINGKVKGGF
TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA
ERDYLMENLQEGIQVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPESTKLNGRVTNLTDYGCFVEIEEGV
EGLVHVSEMDWTNKNIHPSKVVIVGDVVEVMVLDIDEERRRISLGLKQCKFNPWQLFAET
HTKGDRVEGKIKSITDFGIFIGLEGGIDGLVHLSDVSWSMTGEDAVREYKKGDEIIAVVL
QVDAERERISLGIKQLVEDPFNNYLTFNKKGSTVIGRVTAIDSKGATLELMNGVEGYLRA
SEITVDRIEDITLTLSVGDKIEAKFTGVDRKNRLVILSMRAKDQIDEKEAINMAAVNPKQ
EDNSFSNAMVEAFKAAKVE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaatcttttgctcaactttttgaagaatcattacaacagattgaaactcgtcct
ggttctattgttcgtggtgttgtaattgctattgataaagattttgtgttagttgatgct
ggtctaaaatctgaatctagtatttctatagagcagtttaaaaacgcagcgggacaattg
gaaattaagataggagacgaagttgatgttgctttagaagcagtagaagacggttttggt
gaaacgttattatctcgtgaaaaagctaaacgtcatgaagcttggatcatacttgaaaaa
gcataccaaagtactgaaactgtgataggtatcattaatggtaaagtaaaaggcgggttt
acagtggaactaaatggtattcgcgcctttctccctggttcattagttgacgtacgtcca
gttcgcgacacactgcatttagaaggtaaagagctcgaatttaaagtaattaaattggat
caaaaacgaaataatgtggtagtttctcgtcgtgcagttatagaatccgaaaatagcgct
gaacgtgattatttaatggaaaaccttcaggaaggaatacaagttaaaggtattgttaaa
aatctcactgactatggagcctttgtagatttaggtggtgttgatggattgttacatatt
actgatatggcttggaaacgcgttaagcatcctagtgaaattgttaatgtaggagatgaa
attaccgttaaagtattaaaatttgatcgagaacgtactcgtgtatcacttggactaaaa
caattaggagaagatccgtgggttgctattgccaaaagatatccagaaagcacgaagctg
aatggacgagtaactaatttaactgactatggttgtttcgtagaaattgaagaaggcgtt
gaaggactagtacacgtttctgaaatggactggacaaataagaatattcatccttccaaa
gtcgtaattgtcggtgatgtagtagaagtaatggttttagatatcgatgaagaacgccgt
cgtatctccttaggtctaaaacagtgtaaattcaatccctggcaactttttgcagaaaca
cataccaaaggtgatcgtgttgaaggtaaaattaaatctattacggatttcggtatcttt
attggactggaaggtggcatcgatggtttagtgcatttgtctgatgtgtcttggagcatg
acaggtgaagatgctgtacgcgaatacaaaaaaggtgatgaaatcattgcagtagtacta
caagttgatgcagaacgcgagcgtatctcgttaggtataaagcaattagttgaagatcct
ttcaataattatcttacctttaataaaaaaggtagtaccgtaattggtagagttactgct
attgattccaaaggcgctacattggaattaatgaatggtgttgaaggctacttacgtgct
tctgaaattaccgttgatcgtattgaagacataacactgactttgagtgttggcgataaa
attgaagctaaatttacaggagtagatcgtaaaaatcgccttgttatactatctatgcgt
gctaaagatcaaattgatgaaaaagaagctattaatatggcggcggttaatcctaaacag
gaagacaactccttttctaatgctatggttgaagcatttaaagcagctaaagtcgagtga
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