Candidatus Pantoea carbekii: HHS_07400
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Entry
HHS_07400 CDS
T02865
Symbol
uvrB
Name
(GenBank) UvrB protein
KO
K03702
excinuclease ABC subunit B
Organism
hhs
Candidatus Pantoea carbekii
Pathway
hhs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HHS_07400 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhs03400
]
HHS_07400 (uvrB)
DNA repair and recombination proteins [BR:
hhs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HHS_07400 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HHS_07400 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
Helicase_C_2
AAA_22
T2SSE
APC1_3rd_nematode
DUF87
Motif
Other DBs
NCBI-ProteinID:
BAO00710
UniProt:
U3U6V5
LinkDB
All DBs
Position
complement(1029473..1031494)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKVFKLNSSFQPAGDQPKAINTLKEKLKHGVSHLTLLGVTGSGKTFTIANVIADLNRPA
ILIAPNKTLAAQLYGEMKEFFPENAVEFFVSYYDYYQPEAYLPSSDTFIEKDTAVNEHIE
QMRLSATKAILERRDVIIIASVSAIYGLGDPKLYFKMILHLSHGMIIDQRTILGHLAELQ
YVRNDQSFKRGMFRVRGEVIDIFPAELDAVALRIELFDDQVQRLSLFDPFTGQLKSLIAR
FTIYPKNNYVTPRVYMLQAIQKIKEDLQIRCDEFRKSNKFLEAQRIKQRTQFDLEMMQEI
GYCSGIENYSCYFSKRHANQPPPTLLDYLPSDGLLVIDESHVTIPQIFGMYRGDRARKET
LVEHGFRLPSALDNRPLRFEEFEALSLQTIYISATPGNYELKKSDGQVINQIVRPTGLLD
PILEIRPILTQVDDLISEISERVQFNERILVTTMTKRMAENLTEYLEENGKKVRYLHSDI
DTVERVEIIRDFRIGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVKGKAILYADSVTPSMFRAISETERRRKKQKQYNQKHGLIPKGIKKNITDILKCG
NNIIKSRTKRIQCLFDMPETAINYLTFTPQVIQKKIRQLEQKMQKHAKNLEFEEAARIRD
QLYKLRSTMIQNT
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagtttttaaactcaattcctctttccaacctgcaggagaccaacctaaagct
attaacactttgaaagaaaaattgaaacatggagtatctcatctaacattattaggagtt
actggatccggcaagacttttaccatcgctaatgttattgcagatcttaacaggccggca
atactgatagcaccaaataaaacattagcagcacagttgtatggtgaaatgaaagaattt
tttccagaaaatgcagtagaattttttgtttcttattatgattactatcaacctgaagca
tatcttccaagttccgacacttttattgaaaaagatactgccgttaacgaacatattgag
caaatgcgtttgtcagctactaaagcaatactcgaacgtcgtgacgttattataatagca
tctgtttcagcaatttatggtctaggtgatccaaaactttattttaagatgatcctacat
ctatcgcatggtatgattattgatcaacgtaccattttaggccatttagctgaattgcaa
tatgtgcgcaatgatcaatctttcaaacgaggtatgtttcgtgtacgtggggaagtgatt
gatatttttcctgccgaattagatgcagttgcattgcgtattgaattatttgatgatcag
gtacaacgtttatcattattcgatcccttcacgggtcagttaaaatcattgattgcacgt
tttactatttatcctaaaaataattatgtaacaccgcgggtatatatgttacaagcaata
caaaaaatcaaagaagatcttcaaatacgttgcgatgaatttagaaaaagtaataagttt
ttagaagcccagcgtatcaaacaacgcacacaattcgatttagaaatgatgcaagaaatt
ggttattgctcaggcattgaaaattattcttgttatttttctaaacggcacgctaatcaa
ccaccaccaactttattagattatttaccgtctgatggtcttttagtaatagatgaatca
catgttacaattccacaaatttttggcatgtatcgtggcgatcgtgcacgtaaagaaaca
ttagtagaacatggttttcgtttaccatcagcattagataaccgtcctttgcgatttgaa
gaatttgaagcattatcgctacaaactatttatatttctgctacaccgggcaattatgaa
cttaaaaaatctgatggtcaagtaattaatcaaattgtacgtcctacaggactgctcgat
cctattttagaaattcgtccaattttaacacaggtagacgatttaatttcagaaattagt
gaacgagttcaatttaatgaacgtatattagtaactaccatgaccaaacgtatggctgaa
aatcttactgaatatcttgaagaaaatggtaaaaaagtacgttatttacattcagatatt
gatactgtagaacgtgtagagataattcgagattttcgtataggtaaatttgatgtatta
gtaggaattaaccttcttcgtgaaggtttagatataccagaagtttcactagtagcaata
ttagatgcagacaaagaaggttttttgagatctgagcgttctttgattcaaacaattggt
cgtgcagcacgtaatgtaaagggaaaggctattctttatgcggatagcgttacaccatcc
atgtttcgtgctatttcagaaactgaacgacgtcgaaaaaaacagaaacaatataaccaa
aaacatggtctaataccaaaaggtattaaaaaaaacattactgatattcttaagtgcggt
aataatataataaaatcacgcactaagagaatacagtgcttattcgatatgccagaaaca
gcaattaattatctaacatttacaccacaggtaatacaaaaaaaaattcgccaattagaa
caaaaaatgcaaaaacatgcgaaaaatttagaatttgaagaagcagcacgaattcgtgat
caattgtataagttacgtagcactatgattcaaaatacttaa
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