Candidatus Pantoea carbekii: HHS_07540
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Entry
HHS_07540 CDS
T02865
Symbol
sdhA
Name
(GenBank) SdhA protein
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
hhs
Candidatus Pantoea carbekii
Pathway
hhs00020
Citrate cycle (TCA cycle)
hhs00190
Oxidative phosphorylation
hhs00650
Butanoate metabolism
hhs00720
Other carbon fixation pathways
hhs01100
Metabolic pathways
hhs01110
Biosynthesis of secondary metabolites
hhs01120
Microbial metabolism in diverse environments
hhs01200
Carbon metabolism
Module
hhs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hhs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hhs_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
hhs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HHS_07540 (sdhA)
00650 Butanoate metabolism
HHS_07540 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
HHS_07540 (sdhA)
00720 Other carbon fixation pathways
HHS_07540 (sdhA)
Enzymes [BR:
hhs01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HHS_07540 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
GIDA
Pyr_redox_2
DAO
Ins_P5_2-kin
Motif
Other DBs
NCBI-ProteinID:
BAO00724
UniProt:
U3U8M1
LinkDB
All DBs
Position
complement(1051374..1053155)
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AA seq
593 aa
AA seq
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MGYIMRFSIREFDAIVIGAGGAGMRAALQISQLGHNCALLSKVFPTRSHTVSAQGGITVA
LGNTHDDNWEWHMYDTVKGSDYIGDQHAIEYMCKTGPEAVLELEHMGMPFSRLQDGRVYQ
RSFGGQSKNFGGEQAARTAAVADRTGHALLHTLYQQNLKNKTTIFSEWYALDLVKNVDHA
IVGCIAICIETSEIVYFKAKATILATGGAGRIYQSTTNAHINTGDGIGMALRAGVPLQDM
EMWQFHPTGIAGIGILITEGCRGEGGYLLNKYGERLMERYAPNAKDLASRDVVARSMMIE
IREGRGFDNAPWGPHIKLKLDHLGSQILESRLPGILELSRTFAHVDPLKEAIPVIPTCHY
MMGGIPTKITGQALRLNQKGEDEIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAA
GIHLMECIQEQGPLRNATLDEIDAAIKRFNHWQNNTTGEDPINVYKALQKCMQNNFSVFR
EGKSMKQGLEELQSIRKRLKLARLDDRSRDFNTQRIECFELDNLMETAYATAVSANFRTE
SRGAHSRFDYPERDDENWLCHSLYIPQTEIVINRKVNMSPKLRAAFPPKIRTY
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
gtggggtatataatgagattctcaatcagagaatttgatgctatagtcattggagcaggt
ggtgcaggtatgcgtgccgctttgcagatttctcaattaggtcataattgtgcgttgtta
tctaaagtgtttccaactcgttcccatactgtatcggcacagggaggtattacagttgca
ttaggtaatacccatgatgataactgggaatggcatatgtacgatacagttaaaggttct
gattacattggtgatcagcatgcaattgaatatatgtgtaaaactggtcctgaagcagtg
ttagaattagaacatatgggcatgccgttttctcgtcttcaagatggacgagtgtatcag
cgttcttttggtggacaatctaaaaattttggcggtgagcaagcagcacgaactgcagca
gttgcagatcgtactggacatgccttattgcatacactctatcagcaaaacttaaaaaat
aaaactactattttttcagaatggtacgctttagatctagtaaaaaatgttgatcacgcc
attgtaggttgcattgctatttgtattgaaacaagtgagatagtctattttaaagcaaag
gctacgattttggcaacaggtggtgctggtcgtatttaccaatctactaccaatgcacat
atcaatactggtgatggtataggtatggcattacgtgcaggtgtacctttacaagatatg
gaaatgtggcagtttcatccaactggtattgcaggcattggtatacttataacggaaggt
tgtcgtggtgaaggaggttatctattaaacaaatatggtgaacgtttaatggaacgttat
gcccctaatgctaaagatttagcgagtcgtgatgtggtagcacgttcaatgatgatcgaa
attcgagaaggtcgtggttttgataatgctccatggggaccacatattaaattaaaactt
gatcatcttggctctcaaatattggaatctcgtttgccaggaattttagaactatctcgt
acatttgcccatgtcgatccccttaaagaagcaatccctgttattccaacttgtcattac
atgatgggaggtattccaactaaaattactggtcaagcattacgcctgaaccaaaaaggt
gaggacgaaataatacctggcttatttgcagtaggggaagtggcatgtgtatcagtacac
ggcgctaatcgtcttggtggtaattcactgttagatttagtagtatttggtcgtgcagct
ggtattcatttaatggaatgtattcaagaacaaggaccattgcgtaatgcaacattggat
gaaattgatgcggctataaaacgttttaaccattggcaaaataatactacgggtgaagat
ccaataaatgtttataaggcacttcagaaatgtatgcaaaacaatttttcagtttttcgt
gaaggcaaatcaatgaaacagggtttagaagaattacaatctattcgtaaacgattaaaa
ttggcgcggctcgacgaccgttcgcgcgattttaacactcaacgcattgaatgttttgaa
ttagataatttgatggaaaccgcatatgccacagctgtttcggctaactttcgtactgaa
agtcgaggtgcacatagccgttttgactatcctgaacgcgatgatgaaaattggctatgt
catagtctctatataccacaaactgaaattgtaataaatcgtaaagtaaacatgagtcca
aaattacgtgcggcttttccgccaaaaattcgtacttattaa
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