Halodesulfurarchaeum formicicum HSR6: HSR6_0090
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Entry
HSR6_0090 CDS
T04550
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Pathway
hhsr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HSR6_0090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhsr03021
]
HSR6_0090
Transcription machinery [BR:
hhsr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HSR6_0090
Prokaryotic type
Archaeal type
TFB
HSR6_0090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
ORC6_2nd
DZR_2
Cas12f1-like_TNB
RB_B
DUF6398
zf-C2HC_3
DZR
Motif
Other DBs
NCBI-ProteinID:
APE94566
UniProt:
A0A1J1A8W9
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All DBs
Position
complement(90599..91459)
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AA seq
286 aa
AA seq
DB search
MSATETVRTCPECAGALRVDGTETICTECGLVVDEDRIDRGPEWRNFEDGPDRRRTGAPL
SRSRHDRGLSTEIGHSNRVTGRKRRRLSRMRTQHDRSKVRSTAERNQIYGFTEIRRVTAA
LSLPTDIRDQACVLFETAQDESLFPGRSLEGFAAAAVYAVCRTNGLARTTEEITGTAKAS
PEEFQAAYDAMNRELELPTGPIDPGEYLPRFATELGLGSDVEAAARSLLDSTPQAEIGGR
NPSGVAAAALYAVTDVDEGGPTQVEAAELAGVTPVTLRSAARVLVD
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaccgagacggtacggacttgccccgaatgtgcaggcgcccttcgcgtggac
ggcaccgagacgatctgtaccgagtgtggcctcgtcgtggacgaggaccggatcgaccgc
gggccggagtggcgaaacttcgaggacggccccgaccgccggcggactggcgcgccgctc
tcccgctcgcggcacgatcggggcctctccacggaaatcgggcactcgaaccgggtgact
ggccggaaacgccgccggctcagccggatgcgcacccagcacgatcggtcgaaagtgcgc
tcgacggccgagcgcaaccagatctacgggttcaccgagattcgtcgagtcaccgccgcg
ctctcgctgccgaccgacattcgcgatcaagcttgcgtgctcttcgagacggcccaggac
gagtcgctgttcccgggtcgctccctggagggattcgccgcagcggcggtgtacgcagtg
tgtcgcacgaacgggctcgcccgcacgaccgaggagatcaccgggaccgcaaaggccagt
cccgaggagttccaggcggcctacgacgcgatgaaccgcgagctcgagctcccgaccggc
ccgatcgatcccggcgagtatctcccccggttcgcgacggaactgggcctgggctcggac
gtggaggcggcggcccggtcgctcctcgattcgaccccgcaagccgagatcggcggccgc
aatccgagtggcgtcgccgcggccgccctctatgccgtcaccgacgtggacgaaggcggc
cccacgcaggtcgaagccgccgaactggccggtgtaaccccggtcaccctccgctccgcc
gctcgcgtcctggtcgactga
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