Halodesulfurarchaeum formicicum HSR6: HSR6_0116
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Entry
HSR6_0116 CDS
T04550
Name
(GenBank) DNA binding protein, Tfx family
KO
K09714
HTH-type transcriptional regulator, fmd operon transcriptional regulator
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhsr03000
]
HSR6_0116
Transcription factors [BR:
hhsr03000
]
Prokaryotic type
Helix-turn-helix
Other families
HSR6_0116
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFX_C
Sigma70_r4
GerE
HTH_31
Sigma70_r4_2
HTH_23
HTH_7
HTH_3
RepB
DUF7343
MarR_2
HTH_Crp_2
HTH_68
Trp_repressor
HTH_38
Motif
Other DBs
NCBI-ProteinID:
APE94590
UniProt:
A0A1J1A8Z6
LinkDB
All DBs
Position
complement(112402..112872)
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AA seq
156 aa
AA seq
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MTEVPDVTAILARAGFDPSESVLTRRQAEVLALRERGLPQAAIADELGTSRANVSKVETS
ARDNIEKARETVAFAETLQAPVRIDVDPGTDLYEVPDLVYDGCDDAGVKVPYSAPEVMKL
VSEAAGDAIAGREVKQHILVGVTSDGTMRVRVQPED
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggtcccagacgtcactgcgatcctggcccgggccggtttcgacccgtccgaa
agcgtgttgacccgacgacaggcagaggtcctcgcgctccgcgaacgaggactgccacag
gcggccatcgccgacgaactcggcacctcgcgggccaacgtctcgaaagtcgagaccagc
gcccgggacaacatcgagaaggccagagagaccgtcgccttcgccgaaaccctccaggca
ccggtccggatcgacgtggatcccgggacggatctctacgaggtgccggacctggtctac
gacggctgtgacgacgccggggtgaaagttccgtactccgcgcccgaggtgatgaaactg
gtgagcgaagccgccggggacgccatcgccggccgcgaagtgaaacagcacattctcgtc
ggggtcacaagcgacggcacgatgcgcgttcgggtccaacccgaggactga
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