Halodesulfurarchaeum formicicum HSR6: HSR6_0123
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Entry
HSR6_0123 CDS
T04550
Symbol
hisT
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhsr03016
]
HSR6_0123 (hisT)
Enzymes [BR:
hhsr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HSR6_0123 (hisT)
Transfer RNA biogenesis [BR:
hhsr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HSR6_0123 (hisT)
Prokaryotic type
HSR6_0123 (hisT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF7405
Motif
Other DBs
NCBI-ProteinID:
APE94597
UniProt:
A0A1J1A9M0
LinkDB
All DBs
Position
119259..120074
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AA seq
271 aa
AA seq
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MRAYRVAYDGRAYHGFQRQPSLPTVEGALFDALADHGIEFEGAPSKYAAAGRTDAGVSAL
AQTIAFDAPAWLSAQAFTAYLPEDVHVWASTPVPADFHATHHARWREYTYLLHAPSDDPE
RRAEIEARLAGEHDFHNLAAADAGTVRDLSVRSDRTGDYLRVRVRAGGFPRQLVRRLLAL
YDRVLRGERDLAFIDRVLAPEPLPGPEGFPPAPAYPLVLTGVDYDQSFDTDPDAVEAART
VFERRARADRTRAAVGRTLQQGIGGSTGDNP
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcctaccgggttgcctacgacggccgggcctaccacggctttcagcgccagccg
tcgcttccaaccgtcgagggcgcactcttcgacgccctcgcggaccacggcatcgaattc
gagggcgccccgtcgaaatatgcggcggccggccggaccgatgctggggtctcggcattg
gcccagacgatcgccttcgacgcacccgcgtggctctcggcccaagcgttcaccgcctac
ttgcccgaggacgtgcacgtctgggccagcacgccggtcccggctgactttcacgcgacc
caccacgcccggtggcgggagtacacctacctgctacacgcccccagcgacgatccggag
cgccgggccgaaatcgaggccaggctcgccggcgagcacgacttccacaacctcgcggcg
gcggatgcgggcacggttcgagacctctcggtccgaagtgatcggacgggcgattacctc
cgggtccgggtccgggcgggtgggttcccgcgacaactcgtcagacggctgctcgcgctc
tacgaccgggtgctccgtggcgagcgcgatctcgctttcatcgatcgcgtgctcgcccct
gaaccattgcccgggcccgagggcttcccgcctgcgccagcctatcccctcgttctgacc
ggggtggactacgaccagtctttcgacaccgacccggatgcggtcgaggcggcccggact
gtgttcgagcggcgcgctcgtgcggaccgaacccgggccgccgtcggtcgaaccctccag
caggggatcggcgggtcgactggcgacaacccttaa
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