Halodesulfurarchaeum formicicum HSR6: HSR6_0159
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Entry
HSR6_0159 CDS
T04550
Name
(GenBank) TATA-box binding family protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Pathway
hhsr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HSR6_0159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhsr03000
]
HSR6_0159
03021 Transcription machinery [BR:
hhsr03021
]
HSR6_0159
Transcription factors [BR:
hhsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
HSR6_0159
Transcription machinery [BR:
hhsr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
HSR6_0159
RNA polymerase III system
TFIIIB
HSR6_0159
RNA polymerase I system
SL1/TIF-1B
HSR6_0159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
T4bSS_IcmS
Motif
Other DBs
NCBI-ProteinID:
APE94632
UniProt:
A0A1D8S1Z5
LinkDB
All DBs
Position
complement(151459..152019)
Genome browser
AA seq
186 aa
AA seq
DB search
MTDPKETINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQDPKSAALIFR
SGKIVCTGAKSTDDVHESLHIVFDKLRDLSIQVEEEPEIVVQNIVTSADLGRQLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDEPEVVALLFGSGKLVITGGKQPEDAEHAVDKIVSRLE
ELGLLE
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcccaaggaaaccatcaacatcgagaacgtggtcgcctcgaccgggatcggg
caagagctcgatctccagtcggtcgccatggatctcgaaggggccgactacgaccccgaa
cagttccccggactggtctaccggacccaggaccccaagtcggccgcgctgatcttccgc
tccggcaagatcgtctgtaccggcgcgaaaagcacggatgacgtccacgagagcctccac
atcgtcttcgacaagctccgggacctcagcattcaggtcgaggaggagcccgagatcgtc
gtccagaacatcgtcaccagcgccgatctgggccgccagctcaacctcaacgccatcgcg
atcggcctgggtctggagaacatcgagtacgagcccgaacagttccccggactggtctat
cgactcgacgagcccgaagtcgtcgcgctgctgttcggcagcggcaagctggtcatcacc
ggcgggaaacagcccgaagacgccgaacacgccgtcgacaagatcgtctctcggctggaa
gaactcggcctgctcgagtag
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