KEGG   Halodesulfurarchaeum formicicum HSR6: HSR6_0159
Entry
HSR6_0159         CDS       T04550                                 
Name
(GenBank) TATA-box binding family protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
hhsr  Halodesulfurarchaeum formicicum HSR6
Pathway
hhsr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hhsr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HSR6_0159
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hhsr03000]
    HSR6_0159
   03021 Transcription machinery [BR:hhsr03021]
    HSR6_0159
Transcription factors [BR:hhsr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    HSR6_0159
Transcription machinery [BR:hhsr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     HSR6_0159
  RNA polymerase III system
    TFIIIB
     HSR6_0159
  RNA polymerase I system
    SL1/TIF-1B
     HSR6_0159
SSDB
Motif
Pfam: TBP T4bSS_IcmS
Other DBs
NCBI-ProteinID: APE94632
UniProt: A0A1D8S1Z5
LinkDB
Position
complement(151459..152019)
AA seq 186 aa
MTDPKETINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQDPKSAALIFR
SGKIVCTGAKSTDDVHESLHIVFDKLRDLSIQVEEEPEIVVQNIVTSADLGRQLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDEPEVVALLFGSGKLVITGGKQPEDAEHAVDKIVSRLE
ELGLLE
NT seq 561 nt   +upstreamnt  +downstreamnt
atgactgatcccaaggaaaccatcaacatcgagaacgtggtcgcctcgaccgggatcggg
caagagctcgatctccagtcggtcgccatggatctcgaaggggccgactacgaccccgaa
cagttccccggactggtctaccggacccaggaccccaagtcggccgcgctgatcttccgc
tccggcaagatcgtctgtaccggcgcgaaaagcacggatgacgtccacgagagcctccac
atcgtcttcgacaagctccgggacctcagcattcaggtcgaggaggagcccgagatcgtc
gtccagaacatcgtcaccagcgccgatctgggccgccagctcaacctcaacgccatcgcg
atcggcctgggtctggagaacatcgagtacgagcccgaacagttccccggactggtctat
cgactcgacgagcccgaagtcgtcgcgctgctgttcggcagcggcaagctggtcatcacc
ggcgggaaacagcccgaagacgccgaacacgccgtcgacaagatcgtctctcggctggaa
gaactcggcctgctcgagtag

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