Halodesulfurarchaeum formicicum HSR6: HSR6_0183
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Entry
HSR6_0183 CDS
T04550
Symbol
endA
Name
(GenBank) tRNA-intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhsr03016
]
HSR6_0183 (endA)
Enzymes [BR:
hhsr01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
HSR6_0183 (endA)
Transfer RNA biogenesis [BR:
hhsr03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
HSR6_0183 (endA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo_N
tRNA_int_endo
Motif
Other DBs
NCBI-ProteinID:
APE94656
UniProt:
A0A1D8S1Z8
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All DBs
Position
177096..178151
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AA seq
351 aa
AA seq
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MDATLSDGEVHVGGDARQRFFDSRGYGRPLTGNEIALAPVEAAHLLYRGDLDAVDGQGFR
EFLTARGPGFGPRFLVYVDLRDRGFYLSPAREGWVPDADPAVTASDGPDFVVYPRGSGPG
DGEVAYRVTVYGERAEIEAGTLEPGVYAIVDEEGDLTYLAVEEFDPGGETTFDAPENAVG
TLLDDRVLVWDPPESLYEDGFYGQPLAGRGASHEVLHLSLLEAADLAARGVLSLEGGGGV
EALLERGRAVEGERFDRRLRVYRTVRDRGAVPRTGFKFGADFRVYRTVESASELGHSEFL
VRARPRDFVFGPRDLALDVRMAHGVRKRMVYGLDGENGDTTRWLAVGRLTP
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggacgccacgctttccgatggcgaggtacacgtcggtggggacgcgcgacagcgcttt
ttcgactcgcgtggctacggccggccgctcacggggaacgagatcgcactcgcgcccgtc
gaggccgcccacctcctctaccggggggatctcgacgccgtcgacggccagggcttccgc
gagttcctgaccgcccgcgggcccggctttggcccccggtttctggtgtacgtcgacctg
cgcgatcgggggttctacctttcgcccgcccgcgaggggtgggttccggatgccgacccg
gcagtgaccgcttccgacggacccgacttcgtcgtctacccgcgcgggagcggccccggc
gacggcgaggtcgcctatcgggtgacggtgtatggcgaacgcgccgagatcgaggctggg
accctcgaaccgggcgtgtacgcgatcgtcgacgaagagggtgatctgacctatctggcc
gtcgaggagttcgatccgggcggggagacgaccttcgacgcccccgagaacgcagtcgga
accctcctcgacgatcgcgtgctcgtgtgggacccaccagaatcgctgtacgaggacggt
ttttatgggcagccactcgcgggtcggggcgcgagccacgaggtgctccacctctccctg
ctcgaagcggccgacctcgctgctcgcggggtgctctccctggaggggggcgggggtgta
gaggcgctcctcgaacgggggcgggctgtcgagggcgagcgcttcgaccgccggctccgg
gtctatcgcaccgtgcgtgatcggggcgctgtcccccggaccggcttcaagtttggcgcg
gatttccgggtctaccggaccgtcgagtccgcctcggaactgggtcactcggagttcctg
gtgcgggcccggccccgggatttcgtcttcggaccgcgggacctggccctggacgtgcgg
atggcccacggggtcaggaagcgaatggtatatggcctcgacggggaaaacggggacacg
acacggtggctcgccgttggccgcctgacgccctga
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