Halodesulfurarchaeum formicicum HSR6: HSR6_0304
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Entry
HSR6_0304 CDS
T04550
Name
(GenBank) GTP-binding protein
KO
K03231
elongation factor 1-alpha
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Pathway
hhsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HSR6_0304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhsr03019
]
HSR6_0304
03016 Transfer RNA biogenesis [BR:
hhsr03016
]
HSR6_0304
03012 Translation factors [BR:
hhsr03012
]
HSR6_0304
04131 Membrane trafficking [BR:
hhsr04131
]
HSR6_0304
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhsr04147
]
HSR6_0304
Messenger RNA biogenesis [BR:
hhsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
HSR6_0304
Transfer RNA biogenesis [BR:
hhsr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
HSR6_0304
Translation factors [BR:
hhsr03012
]
Eukaryotic type
Elongation factors
HSR6_0304
Membrane trafficking [BR:
hhsr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
HSR6_0304
Exosome [BR:
hhsr04147
]
Exosomal proteins
Proteins found in most exosomes
HSR6_0304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP_EFTU_D3
GTP-eEF1A_C
EF-G_D2
Motif
Other DBs
NCBI-ProteinID:
APE94771
UniProt:
A0A1D8S2D7
LinkDB
All DBs
Position
302278..303888
Genome browser
AA seq
536 aa
AA seq
DB search
MAGDRALLQEALSQGERTDGRVEFKERLSREVHLSEARFESLAAQLRHRVLSGDGEATYV
VGVTDDGAIAGISQAAFSESMDVLSLLAEEAGAHLESVETWGTENGGLVGVATIQDGGAL
EVATDHLIVGTAGHVDHGKSTLVGSLVTGRPDDGEGGMRSYLDVKPHEVERGLSADLSYG
VYGFDEAGPVRVEKPDRKSERAAVVESADRVVSFVDTVGHEPWLSTTIRGLLGQKLDYGL
LTVAADDGPTATTREHLGVLLATDLPTIVAITKTDMVDEAAVETVERDVERLLRQAGRSP
LSVSRHGVEAAIEEIGDGVVPIVRTSAVTMDGLPILDTFFECLPKTAAAGGDFRMYIDRT
YRITGVGPVASGTIESGTVEAGDELLVGPVGETGFRPVEARSIETHYHRVDRAEAGRIVG
IALSGIEESDLTRGMALVPRSADPTPTRSFEAEVMVLNHPTRIHTGYEPVVHLETVSEAA
RIDPLDGQLLPGDSGRAQITFKFNPYLIEEGQQFVFREGQSKGVGTVTAIPGRDSH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgaccgggccctgctccaggaggcgctctcgcagggcgaacggaccgacggc
cgcgtcgagttcaaagagcggctctcccgggaggtccatctctccgaggcacgcttcgag
agtctggcggcacagcttcgccatcgcgtactctccggggacggcgaggccacctacgtc
gtgggcgtgaccgacgacggcgcgatcgcggggatctcacaggcggccttctccgagtcg
atggacgtgttgagcctgctggccgaggaggccggcgcccacctcgaatccgtcgagacc
tgggggaccgaaaacggtgggctggtcggcgtggcgacgatccaggacggcggggccctg
gaagtcgccaccgaccacctcatcgtcggcacggcgggccacgtcgatcacggcaagagc
accctggtcggtagcctcgtgaccggccgcccggacgacggcgagggcggcatgcgttcc
tacctggacgtcaagccccacgaggtcgagcgcggactgagcgcggacctctcgtatggg
gtctatggcttcgacgaggcgggcccggttcgagtcgagaagcccgaccggaaatcagaa
cgcgcggcggtcgtcgagtccgccgaccgggtggtttccttcgtcgacaccgtgggtcac
gagccctggctctcgaccacgatccgggggctgctcggccagaaactggactacgggctg
ctcactgtcgccgccgacgacgggccaaccgcgaccacccgggagcacctgggcgtgctt
ctggcgacggacctcccgactatcgtcgcgatcaccaagaccgacatggtcgacgaagcg
gccgtcgaaaccgtcgagcgggacgtcgagcgcctgctccgccaggcgggtcggagcccg
ctttcggtgtcccgccacggcgtcgaggcagccatcgaggagatcggggacggcgtggtg
cccatcgtccggacgagcgcggtcacgatggacgggctcccgatcctcgatacgttcttc
gagtgtctgcccaagaccgctgcagcgggcggtgacttccggatgtacatcgaccggacc
taccgaatcacgggcgtggggccagttgcctcgggcacgatcgagtcgggaacggtcgag
gcgggggacgaactgctcgtcggtccggtcggggagactggattccggccggtcgaggcc
cggtcgatcgaaacccactaccaccgcgtcgatcgagccgaagcgggccggatcgtcggg
atcgccctgtcgggaatcgaggagtcagacctcactcgagggatggcactggtgccccga
tcggccgatccgaccccgacccggagcttcgaggccgaggtgatggtgctcaaccacccg
actcgcatccacacgggctacgaaccggtcgtccatctggagacggtaagcgaggccgct
cgcatcgacccgctggacggccagttgctcccgggggactccggccgggcacagatcacg
ttcaagttcaacccctacctcatcgaggaaggccagcagtttgtcttccgcgagggacag
agcaaaggtgttgggaccgtaacagctattcccggacgcgactcccattag
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