Halodesulfurarchaeum formicicum HSR6: HSR6_0441
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Entry
HSR6_0441 CDS
T04550
Symbol
truB
Name
(GenBank) tRNA pseudouridine55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhsr03016
]
HSR6_0441 (truB)
Enzymes [BR:
hhsr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HSR6_0441 (truB)
Transfer RNA biogenesis [BR:
hhsr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HSR6_0441 (truB)
Prokaryotic type
HSR6_0441 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
DKCLD
Pus10_C
PUA
Motif
Other DBs
NCBI-ProteinID:
APE94906
UniProt:
A0A1J1A9V5
LinkDB
All DBs
Position
complement(425546..426442)
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AA seq
298 aa
AA seq
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MSTMSSDRPGLRGPPAERDPESLLEFGVINLDKPPGPSAHQVSAWIKDLTGLDRAAHAGT
LDPKVTGVLPVLLGNATRLVPALLEGTKEYVAVLELHASPPADLEATIAKFEGEIYQKPP
RKSAVARRLRTRRVHDLDVLEVEDRQALIRMDVESGTYVRKLCHDIGLALGTGAHMGDLR
RTATTPFDDTTLVTLHDLADALARYEESGQEDWLREVVHPAERALTHIPEVVIAPSAAAE
VANGAPVYAPGVIEGPAEPPSGLVVCKTPNGAAVCLGRQVGDPEAESGVVVELEAVLV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactatgagttctgaccggcccggccttcgtgggccgcccgcggagcgggaccca
gagtcactcctggagttcggcgtcatcaacctcgacaagccacccggcccctcggcccat
caggtctcggcctggatcaaggacctcaccggcctggaccgggccgcccacgccggaacc
ctcgatcccaaggtcacgggtgtcctgccagtcctcctggggaacgcgactcgcctggtg
ccagcgctcctcgaaggaacgaaggagtacgtcgcggttctggaactccacgcgagtcca
cccgcggatctcgaagcgacgatcgccaaattcgagggggagatctaccagaagccgccc
cggaagagcgccgtcgcccgacggctccggacccgccgggtccacgacctcgacgttctg
gaagtcgaggaccgccaggccctcattcgcatggacgtcgagagtgggacctacgtccga
aagctctgtcacgacatcgggttggcgctggggaccggtgcgcacatgggcgatctgcgt
cggacggcgaccacgcccttcgacgacaccacgctcgtcaccctgcacgatctggccgat
gccctggcccggtacgaggagtcgggccaggaggactggctccgggaggtagttcacccg
gccgagcgggcgttgacccacattccggaggtcgtcatcgccccgagtgcggccgcagaa
gtggccaacggcgcgccggtgtacgcgccgggggttatcgaagggccggccgaaccgccc
tcgggactggtcgtctgtaaaaccccgaacggcgcggccgtctgtctgggccggcaggtg
ggtgatcccgaggcggagtcgggggtcgtcgtcgaactcgaagcggtcctggtctga
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