KEGG   Halodesulfurarchaeum formicicum HSR6: HSR6_0465
Entry
HSR6_0465         CDS       T04550                                 
Symbol
nrdJ
Name
(GenBank) ribonucleoside-diphosphate reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
hhsr  Halodesulfurarchaeum formicicum HSR6
Pathway
hhsr00230  Purine metabolism
hhsr00240  Pyrimidine metabolism
hhsr01100  Metabolic pathways
hhsr01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:hhsr00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    HSR6_0465 (nrdJ)
   00240 Pyrimidine metabolism
    HSR6_0465 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hhsr03400]
    HSR6_0465 (nrdJ)
Enzymes [BR:hhsr01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     HSR6_0465 (nrdJ)
DNA repair and recombination proteins [BR:hhsr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    HSR6_0465 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC LAGLIDADG_3 Ribonuc_red_lgN Intein_splicing LAGLIDADG_WhiA Zn_ribbon_RRN7
Other DBs
NCBI-ProteinID: APE94929
UniProt: A0A1D8S2V0
LinkDB
Position
450201..454394
AA seq 1397 aa
MSTERTGEYELPVKRVTGDTLETRLTANAYQNILPARYLKKDADGDLVETQEDLFTRVAR
NIALAEVPYEAANRDLTVTVRPDQVKPDHPRRDELAAEVFGEGTTVEDDVEIELTPENVN
KFAYETVVPEVPDEIRAHVEDLAAQYEELMSTLSFMPNSPTLMNAGNELQQLSACFVNSP
DDDLADIHETAKEAALTFQSGGGMGYAFWKLRPYGDAVGSTGGIASGPITFMRTFDQMTE
TIAQGGTRRGAQMAVMRISHPDVIEFIHSKNKDVSLAHTLKLNDPDDPTYTDFSEALEEA
RALIDEEGRVPEHLRNAVEGHLSNFNISVGVTDGFMEALANDAEYTLTNPRTEEPHIATA
ETKEMYSRYDLGEYVEVGEELSLPASVLWDRIVEGAHENGEPGVIYLERANKEHSFDVEE
HPDHRMLATNPCVTGETLISTEDGLVPAEELYEQGVARDVVVDSRLSEDDATKEASSVFK
TGVKDVYELSTEEGYELRLTADHRMMTDEGWVEAKNLEPGDTVHVQDRKGQFGNHGSAEE
GRVLGWLVGDGHLKNGEERAVLNFYDEDAEISEQFAADVNDVVRDPRGNADYEIGVSEIS
RGDGYRGAQAIEQRVRSARLYEYAEQAGLTDEKLQVPEAVMRGSEVMARGFLRALFTADG
SVQGNVEKGVSVRLTSTDTDLLQEVQQLLLNFGIFSKIYEDRHEAGRQEMPDGKGGTKTY
ERQADHDLVISKDSLVTFREEIGFLREDKNDALDDRLAEYTTSPYSDAFEATVSAVEADG
HEPVYDLTEPDTHSFVANGLVCHNCGEQPLEEYEACNLGHVNLSTIAATDSSDWRAWSAA
NEDAYDSREAAVEAFLEGAIDWAEFDRRIRIGTRFLEDVVTMSDFPVEEITEKVRAMRKI
GLGIMGIAQLFVQLGMRYGSEPANEVARQLMTHINHESKRVSHELALERGSFAEWDNSKY
ADPTRYAEWFEHHTGEDPEDWPEGYPIRNHNTTTIAPTGTTSMVGNTTGGCEPIFNVAYY
KNVSDDVQGEEMLVEFDDYFLRTLEANDIDVEDVKAEATEQMAANEFDGVEGLSTVPDAI
AELFVTSSDLTGKEHASIQTALQEGVDSSISKTVNFPREATVEDMDEVLRYIYDHGGKGV
TVYRDGTRSKQVLTTRADNTEFADMDEAEVAETIIEQIETVFGGFESFLDREDVTELLGS
ELDSIEGPDYAEKRARPAALQGVSQRIDTGYGKLYVTINEDGDGRPFELFANIGHSGGFT
NSFTEALAKVISTALRSGVDPYEIVDELKGTRSPKVAWDKGEQINSIPDAIGTAMYRYLE
DEVDKPYPQQETLDGIEESGTETDGGGAVATNTESEGSTQSLIDAGESPECPECGSMDLY
YSEGCKTCQACGWSECS
NT seq 4194 nt   +upstreamnt  +downstreamnt
atgagtacggagcggacaggggagtacgaactccccgtcaagcgggtcaccggcgacacg
ctcgaaacgcggctcacggccaacgcctatcagaacatcctcccggcccgctacctgaag
aaagacgccgacggggacctggtcgagacccaggaagacctcttcactcgggtcgcgcgg
aacatcgcgctcgcggaggtaccctacgaggcagcgaaccgcgatctgacggtcacggtg
cggccggaccaggtcaagcccgaccacccgcgtcgggacgaactcgccgctgaggtcttt
ggggaggggacgaccgtcgaggacgacgtcgagatcgagctcactcccgagaacgtcaac
aagttcgcctacgagaccgtcgtgcccgaggtccccgacgagattcgagcccacgtcgag
gatttggccgcccagtacgaggagctgatgagcacgctctcctttatgcccaactcgccc
acgttgatgaacgcggggaacgagctccagcagctctcggcctgttttgtcaactctccg
gacgatgatctcgcagatatccacgaaacggccaaagaggccgccttaaccttccagagc
gggggcggcatggggtatgcgttctggaaattacggccctacggcgacgcggtcggctcg
actggcggcatcgcctccggcccgatcacgttcatgcggaccttcgaccagatgaccgag
accatcgcccagggcggcacccgccgcggggcccagatggcggtcatgcgcatctcccac
ccggacgtcatcgagttcatccactcgaagaacaaggacgtctcgctggctcacacgctg
aagctcaacgatccggacgacccgacctacaccgacttctccgaagccctggaagaggcc
cgcgcactgatcgacgaggagggacgggtgcccgaacacctccggaacgccgtcgaaggc
cacctctcgaatttcaacatctctgtcggggtcaccgacggcttcatggaggcgctggcg
aacgacgcggagtacacgctcacgaacccacgcacggaagaaccccacatcgcgacggcc
gagacaaaagagatgtactcccgctacgatctcggggagtacgtcgaggtcggcgaggaa
ctttccctgcccgcctcggtgctctgggaccggatcgtcgagggcgcacacgagaacggc
gagcccggcgtgatctatctggagcgggcgaacaaggaacactccttcgacgtggaggag
catcccgaccaccggatgctcgcgaccaacccttgtgtgaccggtgagacgctgatcagc
accgaggacggcctcgtcccggccgaagaactctacgagcagggagtcgcacgcgacgtc
gtcgtcgacagtcggctgagcgaggacgatgcgaccaaggaagccagcagcgtgttcaag
actggcgtaaaggacgtctacgaactctccaccgaggaagggtacgaactccgcctcact
gctgaccatcggatgatgaccgacgaggggtgggtagaggcaaagaaccttgagccaggc
gacacggtccacgtgcaggaccgaaaaggccagttcgggaaccacggctccgccgaggag
ggccgagtgctgggctggctcgtcggagacgggcacctcaagaacggcgaggaacgtgcc
gttctcaacttctacgacgaggacgccgaaatctccgagcagttcgccgcagacgtcaac
gacgtggtccgtgatccgcgcggcaacgcggattacgagatcggcgtcagcgagatttcc
cggggagacgggtatcgcggcgcccaggccatcgaacaacgggtccgttcggcacgcctc
tacgagtacgccgaacaggctggactcaccgacgaaaagctccaggttcccgaggcggtc
atgcgaggcagtgaagtgatggcccggggattcctcagagccctgttcaccgcggatggg
agcgttcaggggaacgtggagaaaggcgtctcggtccgtctcaccagcaccgacactgac
cttctccaggaggtccagcaactcctgttgaacttcgggatcttcagcaagatatacgag
gaccgccacgaggcaggcaggcaggagatgcccgacgggaagggtggtacgaagacctac
gaacgccaggcggaccacgacctcgtcatctcgaaagattcgctggtcaccttccgtgag
gaaatcggcttcctccgggaggacaaaaatgacgcgctcgacgatcggttggccgaatac
acgaccagcccgtacagcgacgccttcgaggcgacggtgtcggcggtcgaagcggacggc
cacgaaccggtgtacgacctgaccgagccggacacccactccttcgtcgcgaacggcctc
gtctgccacaactgtggcgagcagccgttggaggagtacgaggcctgtaacctcggtcac
gtgaacctctcgactatcgctgcgactgacagttccgactggcgggcctggtcggccgcc
aacgaggacgcctacgacagccgggaggcggccgtcgaggcgttccttgagggggccatc
gactgggcggagttcgaccgccgcatccggatcgggacccggttcctcgaggacgtggtc
acgatgtcggatttcccggtcgaggagatcaccgagaaggtgcgtgcaatgcgcaagatc
gggctgggaatcatgggtatcgcccaattgttcgttcagctcggcatgcgctatggctcc
gaaccggcaaacgaggtcgcccgccagctcatgacccacatcaaccacgagtccaagcgg
gtctcccacgaactggccctcgaacggggcagcttcgcggagtgggacaactccaagtac
gccgaccccacccgctatgccgagtggttcgagcatcacaccggcgaggaccccgaggac
tggcccgagggctatcccatccggaaccacaacacgaccacgatcgccccgacggggacg
acctcgatggtcggcaacaccaccggcggctgtgagcccatcttcaacgtggcctactac
aagaacgtctccgatgacgtgcagggcgaggagatgctcgtcgagttcgacgactacttc
ctccggaccctggaggcaaacgacatcgacgtcgaggacgtgaaagccgaggctaccgag
cagatggccgcaaacgagttcgacggcgtcgagggactctcgacggtgcctgatgccatc
gcggaactctttgtcacctccagtgacctcacgggcaaggaacacgcctcgatccagacc
gccctccaggagggcgtggactcctcgatctcgaagacggtgaacttcccgcgggaggcg
accgtcgaggacatggacgaagtcctgcgctacatctacgaccacggtgggaagggcgtg
accgtctaccgagacggcacccgctcgaagcaagtcctcacgacccgcgcggacaacacc
gagttcgcggacatggacgaggccgaggtcgccgagaccatcatcgagcagatcgagact
gtcttcggcgggttcgagtccttcctcgaccgcgaggacgtcaccgaacttctggggagc
gaactcgattccatcgaggggccggactacgcggagaaacgggctcgacccgccgcgttg
cagggcgtgagccagcgaatcgacactggctatggcaagctctacgtgacgatcaacgag
gacggcgatgggcgccccttcgagctgttcgcgaacatcggccactccggcggcttcacg
aactcgttcaccgaggccctcgcgaaggtcatctcgacggcgctgcgctccggcgtggac
ccctacgagatcgtcgacgagctcaagggaacccgcagccccaaggtcgcctgggacaag
ggcgagcagatcaactcgatccccgatgccatcggcacggcgatgtaccgatatctggag
gacgaggtcgacaagccctatccccagcaggagacgctggacggcattgaagagagcggc
accgaaactgacggtggcggcgcggtcgccacaaatacggaatcggaggggtcaacccag
tcgctcatcgacgccggggagagccccgagtgtcccgagtgtggctcgatggatctgtac
tactccgagggctgtaagacctgccaggcgtgtggctggagtgagtgcagttag

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