Halodesulfurarchaeum formicicum HSR6: HSR6_0553 Help Entry HSR6_0553         CDS       T04550                                  Name (GenBank) ATPase AAA   KO K13525   transitional endoplasmic reticulum ATPase Organism hhsr  Halodesulfurarchaeum formicicum HSR6 Pathway hhsr04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:hhsr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     HSR6_0553  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:hhsr03019]     HSR6_0553    03009 Ribosome biogenesis [BR:hhsr03009]     HSR6_0553    04131 Membrane trafficking [BR:hhsr04131]     HSR6_0553   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:hhsr04147]     HSR6_0553 Messenger RNA biogenesis [BR:hhsr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Ran-mediated transport factors      HSR6_0553 Ribosome biogenesis [BR:hhsr03009]  Eukaryotic type   Pre-60S particles    Ribosome quality control proteins     HSR6_0553 Membrane trafficking [BR:hhsr04131]  SNARE   SNARE associated proteins    Others     HSR6_0553  Autophagy   Aggrephagy    Other aggrephagy associated proteins     HSR6_0553 Exosome [BR:hhsr04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    HSR6_0553 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA AAA_lid_3 CDC48_N CDC48_2 RuvB_N AAA_16 AAA_2 AAA_14 AAA_5 AAA_22 TIP49 nSTAND3 NPHP3_N AAA_33 AAA_28 RNA_helicase IstB_IS21 AAA_18 Mg_chelatase AAA_7 ABC_tran AAA_17 AAA_3 NACHT DUF815 AAA_lid_PRS2_C TsaE SLFN-g3_helicase AAA_24 AAA_25 Parvo_NS1 Sigma54_activat Zeta_toxin AAA_11 NB-ARC AAA_19 AAA_30 PhoH KAP_NTPase bpMoxR NTPase_1 Zot Histidinol_dh Motif Other DBs NCBI-ProteinID:  APE95015 UniProt:  A0A1J1ABA0 LinkDB All DBs Position complement(528464..530752) Genome browser AA seq 762 aa AA seqDB search MSDTLKLVVKPLKQKDAGRGLAAIDRRAMEELDLENGDYILIEGPNQGRAVARVWPGYPE DEGKNIVRIDGRLRQEANVGIDDRVEIEKADIKPATSVTIALPQNLRIRGNVEPMLREKL SGRPVTTGQTVPVSLGFGGIASVSGQQIPLKIADTDPEGTVVVTDSTEIHVSERPAEEIT TETETVDTQTPSITYEDIGGLDDELEQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPG TGKTLIAKAVASEIDAHFQTISGPEIMSKYYGESEEQLREVFEEAEEKAPAVIFIDELDS IAPKRDETAGDVERRVVAQLLSLMDGLEERGDVVVIAASNRVDAIDPALRRGGRFDREIE IGVPDRDGRTEILQVHTRGMPLADSVDIDEYAENTHGYVGADIEQLAKEAAMNALRRIRP QIDLEADEIDAEILEELTVTDRDFSEAMKGITPSGLREVFIEVPDVTWEQVGGLEETKER LRETVQWPLDFPEVFEQMDLDTPRGILLYGPPGTGKTLLAKAVASEAKNNFISVKGPELL NKYVGESEKGIREIFQKARQNAPTVIFFDEIDAIAGQRGRQMGDSGVGERVVSQLLSELD GIESLEDVVVIATTNRPDLIDDALLRPGRLDRHIHVPIPDEAARRAIFEVHTENKPLADS VDLDELARRTENYVGADIEAVCREATMQATREFLNSVDPAEATQGAANVRVTAEHFEHAL EEVSPSIDDEIKRRYEELEERFTKARAESEAGVDDQFGRSFQ NT seq 2289 nt NT seq  +upstreamnt  +downstreamnt atgagcgacacgctcaaactggttgtcaagcccctcaagcagaaggacgcggggcgggga ctggcagccatcgaccgacgagcgatggaggaattggacctggagaacggcgattacatc ctcatcgaggggccgaaccaggggcgggccgtcgctcgggtctggcccggctatcccgag gacgagggcaagaacatcgtccggatcgacgggcgcctccggcaggaggcaaacgtcggc atcgacgaccgcgtggagatcgagaaggccgacatcaagccggccacatccgtgacgatc gccctgccacagaacctccggattcggggcaacgtcgagccgatgctccgggagaaactc tccggccggcccgtcaccaccggacagacggtgccggtctcgcttggcttcggtgggatc gcctccgtctcgggccagcagatccccctcaagatcgcggacaccgaccccgaagggact gtcgtcgtcaccgactcgacggagatccacgtgagcgagcgccccgcagaggagatcacc accgagaccgagacggtcgatacccagacccccagtatcacctacgaggacatcggcggc ctggacgacgaactcgaacaggtccgggagatgatcgagttgccgatgcgccaccccgag ctcttccagcagctcggcatcgaaccgcccaaaggggtgctcctccacgggccgcccggc acgggcaagaccctgatcgcgaaggccgtcgccagcgagatcgacgcgcacttccagacg atctccggcccggagatcatgtccaaatactacggggagtcagaagaacagctccgggag gtcttcgaggaggccgaggagaaggcccccgcagtcatcttcatcgacgaactggactcc atcgcgccgaaacgcgacgagacagccggcgacgtcgagcgacgggtcgttgcgcaactg ctctccctgatggacgggctcgaagagcgtggcgacgtggtcgtgatcgccgcctcgaac cgtgtcgacgcgatcgatcccgcgctccggcgtggcggtcggttcgaccgtgagatcgag atcggcgtcccggaccgggacggtcggaccgagatcctccaggtccacacccgcggaatg ccactggccgacagcgtggacatcgacgagtacgcggagaacacccacggctacgtgggc gcggacatcgagcaactggccaaagaggccgcgatgaacgccctgcggcggatccgtccc cagatcgacctggaggccgacgagatcgacgccgagatcctggaggaactcacggtaacg gaccgtgacttctcggaggcgatgaagggcatcacgccctccgggcttcgggaggtcttc atcgaggtccccgacgtgacctgggaacaggtcggtggtctcgaagagaccaaagagcgg ctgcgcgagaccgttcagtggcccctcgacttccccgaggtcttcgagcagatggacctc gataccccccgcgggattctcctgtatgggccgcccggaacggggaagaccctcctcgcg aaagccgtcgccagcgaggccaagaacaacttcatctcggtgaaaggccccgaactcctg aacaagtacgtgggcgaatccgagaaggggatccgggagatcttccagaaggccagacag aacgccccgacggtgatcttcttcgacgagatcgacgccatcgcgggccagcgcggccgg cagatgggcgattcgggcgtgggcgaacgcgtggtctcccagctgctgagcgaactcgac ggcatcgaatccctcgaggacgtggtcgtgatcgcgacgacgaaccgtccggacctgatc gacgacgccctgctccgtccgggccggctggaccggcacatccacgtgccgattccggac gaggcagcccgacgggccatcttcgaggtgcacacggagaacaagcccctggccgacagc gtcgatctggacgagttggcccgtcgcaccgagaactacgtcggtgcggacatcgaggcg gtctgccgcgaggcgaccatgcaggccacccgggagttcctcaacagcgtcgatcctgct gaggccacccagggcgcggccaacgtccgtgtgaccgccgagcacttcgagcacgcactc gaagaggtctcgccctcgatcgacgacgagatcaagcgccgctacgaggagctcgaagaa cggttcacgaaggcccgggccgaatcagaagcgggcgtcgacgaccagttcggccggagc ttccagtaa

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