Halodesulfurarchaeum formicicum HSR6: HSR6_0875
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Entry
HSR6_0875 CDS
T04550
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase)
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Pathway
hhsr00541
Biosynthesis of various nucleotide sugars
hhsr01100
Metabolic pathways
hhsr01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HSR6_0875 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hhsr01005
]
HSR6_0875 (kdsB)
Enzymes [BR:
hhsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
HSR6_0875 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
hhsr01005
]
Lipid A
HSR6_0875 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DAGK_cat
NTP_transferase
DIP0205-like_N
Motif
Other DBs
NCBI-ProteinID:
APE95328
UniProt:
A0A1J1AC27
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Position
823434..824300
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AA seq
288 aa
AA seq
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MKTVGTACCPADAAQKVKNECSYVSQYNGGDGAVRDILNHLETASQIALGVIPARYGSTR
LPGKPLVEIAGKPMIQHVYERASRANLLDDLIVATDDERIVEAVEAVGGTAMMTEADHPT
GTDRVAEVAANVGADFTINIQGDEPLINPDLIDAIVTALRENSPKVATPISPIEDESLLN
DENTVKVVTDADGRALYFSRSKIPSGGETGTTYKHIGLYGFETELLLKYINMESELESVE
DLEQLRLLENGYEIQTVETDYNSKEVNVESDIMRVEKEIEQIHTHGTQ
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgttgggacggcttgttgtcccgcagacgcggctcaaaaagtaaaaaacgag
tgttcgtacgtcagccagtacaacggtggcgacggagccgttcgggacatcctgaaccac
ttagaaacagcttctcaaatagcacttggcgttattcccgctcgatatgggtcaacgcgt
ctgcccggtaaaccattagtcgagatagctggcaagccgatgattcagcatgtatacgag
cgtgcgagcagagcgaacttgcttgacgacctcatcgttgcaacagacgatgaacgcatt
gttgaggcggtcgaggcggtcggcggcaccgcaatgatgaccgaagctgatcacccgaca
ggaacggatcgggtggcagaagtggctgcgaatgtcggcgcggactttacgatcaatatc
cagggcgacgagccgctaattaaccctgatctcatcgacgcaattgtgacggctcttaga
gagaactctccgaaagtcgcaacgccgatctccccaattgaagatgaatcactccttaac
gacgaaaacacggtcaaggttgtaaccgacgccgacggaagggcgctttacttttcgcgg
tcgaaaataccatcaggtggagaaacaggaacgacgtacaaacatatcgggctgtatgga
ttcgagacagagctcctactcaaatacatcaatatggagtcagaactcgaatccgttgaa
gacctcgaacaacttcggctgcttgaaaatgggtacgaaatacaaactgttgagacagac
tacaactcaaaagaggttaacgtggaaagtgatataatgagggtggaaaaagaaatagaa
cagatacacacccatggaactcagtaa
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