Halodesulfurarchaeum formicicum HSR6: HSR6_1014
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Entry
HSR6_1014 CDS
T04550
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhsr03400
]
HSR6_1014 (smc)
DNA repair and recombination proteins [BR:
hhsr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HSR6_1014 (smc)
Archaeal homologous recombinant proteins
HSR6_1014 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_27
AAA_15
AAA_29
AAA_21
AAA_13
MukB
ABC_tran
Fib_alpha
Motif
Other DBs
NCBI-ProteinID:
APE95466
UniProt:
A0A1J1ABF8
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Position
964927..967596
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AA seq
889 aa
AA seq
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MRFDRLSLQNFKCFEDADFRLDTGVTVVHGVNGSGKSSLLEACFFALYGATAIDRTLDEI
VTIGAEETTVDLWFTHEGESYHLHRRIRATGERAVTADCTLEGPNSTLDGVGDVEDRVRS
MLRMDASAFVNSAFVRQGEINKLIEASPGDRKRMIDRLLQLGRLETYRERAAEARLGVEN
LKERRSGRLDSLEEQIAEKDESTLYERANALESAIGDLESEIEQLESGRESARETLSEAE
STLETHEQRREELATITERIETLQERIAEDERRRQELAETITDRRQEIETRTDTIETRAT
ELDLDSTDPDAIEAAIEAAREEKERLTEAIMDLREAVQGAEHEAETATERAKTLQSRATD
RRERASELETKQSQLEAEIEAEREAIEEAAAEIETHLSAFTAASIEYGEGAAAIEERREA
LEAARETETERREELATVQSRIEEAEALLEAGKCPECGQPVDGAPEVESLEADREEQERL
EAALESERERRRELEDELDAAEALREHEREIEGLISTVESHGERLAEKRDSLAETRTRRD
ELQSEATDLEDEAAKAEKTAEKAQKRAAETREKIGEHNQERSEYADHIEALESLLETVEA
VESLREEIERAQETRESIDDRNDERRETLTELRERKRTLDEQIDDERVEQARQNREDATD
YLEQVETELAEKREQHDEHRSELGAVQNELEELQALEDQRAAVTETVEALDSLHAELSEL
ESMYARLRTDLRQRNVSRLEALLNETFDLVYRNDSYARIELDGDYELTVYQKDGSPLSPD
QLSGGERALFNLSLRAAIYRLLVEGIDGAAPMPPLILDEPTVFLDSGHVSQLVALVESMR
DLGVEQIIVVSHDEELIGAADDLVRVEKDPTTNRSTVETDGFVLPEADD
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
gtgagattcgaccgactctcgctgcagaacttcaagtgcttcgaagacgccgatttccgg
ctcgataccggcgtgacagtcgttcatggtgtcaacgggagcgggaagtcatcgctgctg
gaagcgtgtttcttcgcgctttacggcgcgacggcgatcgaccgaacgctggacgaaatc
gtcactatcggtgcggaggagacgacagtcgacctctggttcacccacgagggtgagtcc
taccaccttcaccggcggatcagggccacgggcgagcgggccgtgactgccgactgtacg
ctcgaaggaccaaattcgacgcttgacggggtcggggacgtggaggatcgcgttcgatcg
atgctgcgaatggacgcctcggccttcgtgaactccgcgttcgtcaggcagggagagatc
aacaagctcatcgaggcgagccctggcgatcgcaagcggatgatcgaccgcctccttcag
ctcggccgactggagacctatcgcgagcgtgcggccgaggctcgattgggcgtcgaaaat
ctcaaagaacggcgttcgggacgactcgactccctcgaggaacagatcgcggagaaagac
gagtcgaccctttacgagcgggcgaacgcgctggagtcggcgatcggggacctcgaatcc
gagatcgagcaactcgaatcggggcgggagtcggcccgcgagaccctttcggaagcagaa
tcgaccctcgaaacccacgaacagcgccgggaggagctcgcgactatcacggagcgcatt
gagacactgcaggagcgaatcgccgaggacgagcgccgacgccaggagttagcagagacc
atcacggaccggcggcaggagatcgagacccggaccgacactatcgagacgagagccacg
gagctagatctcgactcgaccgatccggacgcgatcgaagcggcaatcgaagcggctcgc
gaggaaaaagagcggctcaccgaggcgatcatggacctccgcgaggccgtgcagggggcc
gaacacgaggccgagaccgcaaccgagcgcgcgaaaacactgcagtcccgagccaccgat
cgccgggagcgtgcctcggagctcgaaacgaagcaatcacagctcgaagccgagatcgag
gccgaacgggaggcaatcgaggaggccgccgcggagatcgaaacccatctctcggcgttt
accgcggcctccatcgagtacggcgagggggccgctgccatcgaggagcgtcgggaggcc
ctggaagcggcccgggagacggagacggagcgtcgcgaagaactcgcgaccgtccagtcc
cgaatcgaggaggccgaagcgctgctcgaagcggggaagtgcccggaatgtggacaaccc
gtcgacggggcacccgaagtcgagtccctggaggccgaccgcgaggaacaggaacgcctg
gaagcggccctcgaatcggagcgcgagcgccgcagggaactcgaagacgagctggacgcg
gccgaggccctccgggagcacgaacgcgaaatcgagggactgatttcgacggtcgaatcc
cacggtgaacgactcgccgaaaagcgagactcactcgccgaaacccggactcggcgggac
gaactgcagtcggaagccactgacctcgaagacgaggcggcaaaagcagaaaagacggcc
gaaaaggcgcagaaacgggcggcggagactcgcgagaagatcggcgagcacaaccaggaa
cgaagcgagtacgcggatcacatcgaggcccttgagtcgctcctggagacggtcgaagca
gtcgagtcacttcgagaagaaatcgaacgggcccaggagacccgcgagtcgatcgacgac
cgaaacgacgagcgccgggaaacgcttaccgaactacgggagcgcaaacggaccctcgac
gagcagatcgacgacgaacgggtcgaacaggcccggcaaaaccgagaagacgccacggac
tacctcgaacaggtcgagaccgaactcgccgaaaaacgcgagcagcacgacgagcaccgg
agtgaactcggcgcggtccagaacgaattagaggagctccaggcactcgaagaccagcgg
gcggccgtcacggagaccgtcgaggccctcgactcgttgcacgcggaactgtccgagctg
gaatcgatgtacgctcggctccggaccgacctccgtcagcgaaacgtctcccggctcgaa
gccctgctgaacgagaccttcgatctggtctatcgcaacgattcctacgcccggatcgaa
ctggacggtgactacgagctgacagtctaccagaaggacgggtcgccgctctcgcccgac
cagctctccggtggcgagcgggcgcttttcaacctcagcctccgtgcagcgatctaccgc
ctgctcgtcgagggtatcgacggagccgcgccgatgccaccgctgatactggacgagccg
acggtgttcctcgattccggccacgtctcccagctcgtggccctcgtggagtcgatgcgg
gatctgggcgtcgagcagatcatcgtcgtcagccacgacgaggaactcatcggggccgct
gatgacctcgtccgggtcgagaaagatccgacgaccaaccggtcgacggtcgagactgac
gggttcgtgttgccagaagccgacgattaa
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