Halodesulfurarchaeum formicicum HSR6: HSR6_1405
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Entry
HSR6_1405 CDS
T04550
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Pathway
hhsr00300
Lysine biosynthesis
hhsr00470
D-Amino acid metabolism
hhsr01100
Metabolic pathways
hhsr01110
Biosynthesis of secondary metabolites
hhsr01120
Microbial metabolism in diverse environments
hhsr01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HSR6_1405 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HSR6_1405 (dapF)
Enzymes [BR:
hhsr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HSR6_1405 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
APE95848
UniProt:
A0A1J1ADK7
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Position
1348919..1349746
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AA seq
275 aa
AA seq
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MNVPYRQYHGTGNAFAVVEAAALETDRAAFAQSACAELGVDGILFLELDPETDPTRVGFT
LYQPDGSTAEMCGNGARVAARWAHEQTGNRKFRLDTPAGDRLADVDADQTNVTVEMGEPT
FEPAEIPVESEGPMIEEPFEGLTISAVNTGVPHAVAFLRSVEEVALEAMAQPIRYADEFP
AGTNVTVAEYVGPNEFRQRTYERGVEGETQSCGTGAVAIAAVAVRQELAEAGTPIEVSPP
GGTLTVTVPTDGPATLAGPTVFEREGTVEFEGANR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttccctatcgccagtaccacgggacgggcaacgcattcgcggtcgtcgaagcc
gcggctctggagaccgaccgggcggcgtttgcgcagtcggcctgtgcggagttgggggtg
gatgggatcctctttctggaactcgatcccgaaaccgatcccacccgggtcggcttcaca
ctctaccagccggacggcagcacggccgagatgtgtggcaacggagccagggtggccgcc
cggtgggcccacgaacagactggaaatcgaaagtttcgcctcgacaccccggccggggac
cgactcgcggacgttgatgcggaccagaccaacgtgaccgtcgagatgggcgaaccgacc
ttcgagccggccgaaatccccgtggaatcggagggaccgatgatcgaggagcccttcgag
gggctgacgatctcggctgtcaacacgggtgtgccccacgcggtggcgttcctccggtcg
gtcgaggaggttgccctggaggccatggcccagccgatccgctacgcggatgaatttccg
gcgggcacgaacgtcacggttgccgagtacgtcgggcccaacgagttcagacagcgcacc
tacgagcggggcgtcgagggtgagacccagtcctgtgggaccggcgcagtcgcgatcgcc
gccgtcgccgtcagacaggaactggccgaggctggaacgccgatcgaggtgtcgccaccg
ggcggcacgctgacggtgaccgtcccgacagacgggccagccacgcttgcgggcccaacg
gtcttcgagcgcgagggaacggtcgagttcgagggggcgaaccgatga
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