Halodesulfurarchaeum formicicum HSR6: HSR6_1486
Help
Entry
HSR6_1486 CDS
T04550
Symbol
topA2
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhsr03032
]
HSR6_1486 (topA2)
03400 DNA repair and recombination proteins [BR:
hhsr03400
]
HSR6_1486 (topA2)
Enzymes [BR:
hhsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HSR6_1486 (topA2)
DNA replication proteins [BR:
hhsr03032
]
Prokaryotic type
DNA Topoisomerases
HSR6_1486 (topA2)
DNA repair and recombination proteins [BR:
hhsr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HSR6_1486 (topA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
DUF4332
Cdd1
Toprim_4
DUF1351
Motif
Other DBs
NCBI-ProteinID:
APE95929
UniProt:
A0A1J1AEC4
LinkDB
All DBs
Position
complement(1426024..1428504)
Genome browser
AA seq
826 aa
AA seq
DB search
MELIITEKNNAARRIADILSDGSARTERVGGVDVYAWGTHRVIGLAGHVVGVDFPPEYED
WRDVEPAELVHAPIETRVTKPDIVTSLKRLARKADRVVIATDYDREGELIGKEAYELVRE
VEESVPVDRVRFSSITENEVKTAFANPDELDFELAAAGEARQRIDLLWGAALTRFLSLSA
GQRGQDFISVGRVQTPTLKLVVDKEREIQAFDPETYWELFADLAGGETTFQAQYFYDDDG
SEAERIWDETHATDAEADLAGAGTASVESVRRRQRTDDPPAPFDTTQFIKAAGSLGFNAG
QAMSIAEDLYTAGYITYPRTDNTVYPDDLEPAELLAVFEGTPFDEAASSLLAGEDLEPTR
GESETTDHPPIHPTPDVPDQGDLSEDEWTVYELVTRRFFATLAEPAVWEHLRVVAVAEGR
TLKANGKRLVEPGYHAVYPYVDTSENYVPDLEEGQTLSIDAVDLEEKETQPPRRYGQSRL
IETMEKLGIGTKSTRHNTIEKLYDRGYLEDDPPRPTQLAMAVVEAAEEYADLVVSEEMTQ
ELEAEMTAIVEGEKELEDVTADSRDALDRIFDLLGASRAEIGEHLRSSLKADRTLGPCPE
CGRDLLIRENRYGSYFVGCDGYPDCEFTAPLPNRGEPQVMDETCDRHDLHHVKMLDGRNT
FVHGCPLCQVEDAESTEDTVIGPCPECGEEHGGELAIKHLRNGSRLVGCTRYPDCEYAVP
LPRRGEIEVTEERCADHDLPKLRIHDDDDDEPWEFGCPICNYQEYAARQNGDLESIDGIG
EKTKDKLVEAGIESVPALLKADPDELAGEVDGVSADRIRDWQQSVG
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
gtggaactcatcatcaccgagaagaacaacgccgcccgtcgtatcgcagacatcctcagc
gacggttccgctcgaaccgaacgcgtcggcggcgtcgacgtgtacgcctgggggacccac
cgcgtgatcgggctcgccggccacgtcgtcggggtggacttcccgccggagtacgaggac
tggcgggacgtcgaaccggccgaactggttcacgcgccgatcgagacccgggtgacgaaa
ccggacatcgtcaccagcctcaagcgactcgccaggaaggccgaccgcgtcgtgatcgcc
accgactacgaccgcgagggcgaactcatcgggaaggaggcctacgaactcgtccgcgag
gtcgaggagtcggtgccggtcgatcgggtgcggttctcctcgatcaccgaaaacgaggtc
aaaaccgccttcgcgaacccggacgaactggacttcgagctggccgcggccggcgaagcc
cgccagcgcatcgacttgctctggggggccgcactcacccgatttctctcactttcggcc
ggacagcgcggccaggacttcatcagcgtggggcgggtccagacgcccacgctcaaactc
gtcgtcgacaaggagcgggagatccaggccttcgatcccgagacctactgggagctcttc
gccgatctcgcgggtggcgagacgaccttccaggcccagtacttctacgacgatgacggc
tccgaggccgagcggatctgggacgaaacgcatgccaccgatgccgaggcggacctcgcc
ggggccgggaccgcgagtgtggaatcggtccggcgacgacagcgcaccgacgacccgccc
gcacccttcgacaccacgcagttcatcaaggcggccgggtcgctggggttcaacgcgggt
caggcgatgagcatcgccgaggatctgtacaccgctggctacatcacctacccgcggacg
gacaacaccgtctatccggacgacctggagcccgccgagttgctcgcggtcttcgagggg
acccccttcgacgaggcggcgagttcgctccttgcgggcgaggacctggagccgacccgt
ggggagtccgagacgaccgatcacccgccgattcaccccacgccggacgtgcccgaccag
ggggatctctccgaggacgagtggacggtctacgaactcgtgacccgtcgctttttcgcg
acgctcgcggagccggccgtctgggagcacctgcgcgtggtggccgtcgccgagggccgc
acgctcaaggcgaacggcaagcgcctggtcgagccgggatatcacgcggtctacccctac
gtcgacacctcggagaattacgtccccgatctggaggagggccagaccctgtcgatcgac
gccgtggacctcgaagagaaggagacccagccaccccgacggtacggccagtctcgactc
atcgagaccatggagaagctgggcatcgggacgaagagtacccgccacaacaccatcgag
aagctctacgaccgcgggtatctggaggacgacccgccgcgtccgacccagctcgcgatg
gcggtcgttgaggccgccgaggagtacgccgacctggtcgtcagcgaggagatgacccag
gagctcgaagcggagatgacggccatcgtcgagggcgagaaggaactcgaggacgtcact
gcggactcccgggacgcactggaccgaatcttcgacctgctcggggcttcgcgggcggag
atcggtgagcacctccggtcctcgctgaaggccgaccgaaccctcgggccgtgtccggag
tgtggccgggacctcctgattcgcgaaaaccggtatggctcctacttcgtgggctgtgat
ggctatccggactgtgagttcaccgctccgctcccgaatcgtggcgagccccaggtcatg
gacgagacctgtgaccgacacgatctgcaccacgtcaagatgctcgacgggcgaaacacc
ttcgtccacggctgtccgctctgtcaggtcgaggacgccgagtcgaccgaggacacggtc
atcggcccgtgtccggagtgtggcgaggaacacggcggcgaactggcgatcaaacacctc
cgaaacggctcccgactggtgggctgtacccgctaccccgactgtgagtatgccgtcccg
ctgccccgccgcggtgagatcgaggtcacggaggagcgctgtgcggaccacgacctgccc
aaactccgcattcacgacgacgatgacgatgagccctgggagttcggctgtccgatctgt
aactatcaggagtacgccgcccggcagaacggtgacctcgaatccatcgacggaatcggg
gaaaagaccaaggacaagctcgtcgaggcgggcatcgagtcggtgccggccctgctaaag
gccgacccggacgagttggctggcgaggtcgatggggtctcggccgaccggatccgggac
tggcaacagagcgtgggctga
DBGET
integrated database retrieval system
