Halodesulfurarchaeum formicicum HSR6: HSR6_1507
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Entry
HSR6_1507 CDS
T04550
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Pathway
hhsr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HSR6_1507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhsr03021
]
HSR6_1507
Transcription machinery [BR:
hhsr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HSR6_1507
Prokaryotic type
Archaeal type
TFB
HSR6_1507
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Sigma70_r4
BRF2-like_C_cyclin_rpt
Zn_ribbon_RPB9
Zn_ribbon_NUD
HTH_Tnp_ISL3
Auto_anti-p27
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
APE95950
UniProt:
A0A1D8S5I1
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All DBs
Position
1452272..1453222
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AA seq
316 aa
AA seq
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MPNATLRSREKEEEEPERTDSCPECGGLVVHDEEHSEKVCADCGLVVEEEGIDRGPEWRA
FDSQEKDEKSRVGAPTTNTMHDKGLSTNIDWRNKDAYGNSLGSRQRQKMQRLRKWNERFR
TRDAKERNLKQALGEIDRMASALGLPDNVRETASVIYRRALEEDLLPGRSIEGVATSCVY
AAARQAGVPRSLDEINDVSRVDKDEIARTYRYVIRELGLEVKPADPASYVPRFASSLELS
DEAQHRARELLENAKEKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAKVSEVADISEVTI
RNRYHELLEAEDSIPV
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacgcaactctcagatcccgcgaaaaagaagaggaggaacccgaacgaacggac
agctgtccggagtgtggcggtctggtcgtccacgacgaggaacacagcgagaaggtctgt
gcggactgtggcctggtcgtcgaggaggaagggatcgaccgcgggcccgagtggcgggcc
tttgactcccaggagaaagacgagaagtcccgggtcggggcccccaccacgaacacgatg
cacgacaagggcctctccacgaacatcgactggcggaacaaggacgcctacggcaactcc
cttggctcccgacagcgccagaagatgcagcgcctgcgcaagtggaacgagcgctttcgc
acccgtgacgccaaggagcgcaacctcaagcaggccctcggcgagatcgaccggatggcc
agtgcgcttggcctgccggacaacgtccgcgagacggcctcggtgatctaccgccgggcc
ctcgaagaagatctgctcccgggccgttcgatcgagggcgtcgcgacttcctgtgtctat
gccgccgcccggcaggccggagtgccccgcagcctggatgagatcaacgacgtcagccgg
gtcgacaaggacgagatcgcccgcacctaccggtacgtgatccgggaactgggcctggaa
gtcaagcccgcggaccccgcgagttacgtcccccggtttgcctcctcgctcgaactcagc
gacgaagcccagcatcgggcccgcgaactgctcgagaacgccaaggagaaaggcgtccac
agcggcaagagcccggtcggcctggccgccgccgcggtgtacgcggccgccctgctcacc
aacgagaagacaacccaggcgaaggtcagtgaggtcgcggacatctcggaggtcacgatc
cgcaaccgatatcacgaactcctcgaagccgaggactcgattccggtctaa
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