KEGG   Halodesulfurarchaeum formicicum HSR6: HSR6_1546
Entry
HSR6_1546         CDS       T04550                                 
Symbol
tfb3
Name
(GenBank) transcription initiation factor TFB
  KO
K03124  transcription initiation factor TFIIB
Organism
hhsr  Halodesulfurarchaeum formicicum HSR6
Pathway
hhsr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hhsr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    HSR6_1546 (tfb3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hhsr03021]
    HSR6_1546 (tfb3)
Transcription machinery [BR:hhsr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     HSR6_1546 (tfb3)
 Prokaryotic type
  Archaeal type
    TFB
     HSR6_1546 (tfb3)
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF A2L_zn_ribbon Zn_ribbon_IS1595 Zn_Ribbon_Prim Zn_ribbon_RRN7 Zn_ribbon_PaaD Zn_ribbon_LysW Zn_ribbon_tTFIIB Lar_restr_allev Zn_ribbon_8 Trm112p Ribosomal_S27e Zn_Ribbon_YjdM Zn_ribbon_Elf1 FtrD-like Zn_ribbon_3 Cyclin_C Cas12f1-like_TNB Sigma70_r4 zf-tcix Zn_ribbon_Top1
Other DBs
NCBI-ProteinID: APE95989
UniProt: A0A1D8S5M5
LinkDB
Position
1485799..1486758
AA seq 319 aa
MTRSTRQRERQAAETEESKEGVRECPECGSEDLVKSSDRGELVCNECGLVLEEEKIDPGP
EWRAFNHQERQQKSRVGAPTTQTMHDKGLTTTIDWKDKDAYGRSISSKKRSQMHRLRKWQ
ERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALKEDLIRGRSIEGVAT
SALYASCRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMKPVDPKKYVPRFCSE
LELSEEVQSKANEIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQVT
EVTIRNRYQEQIEAMGIHN
NT seq 960 nt   +upstreamnt  +downstreamnt
atgacacggtctacccgccagcgggagcgacaagcggccgagaccgaggagtcaaaagag
ggcgtcagggagtgcccggaatgtggctccgaggatctggtcaaaagctccgaccggggc
gagctcgtctgtaacgagtgtggactcgtcctggaagaggagaagatagaccccggcccg
gagtggcgcgccttcaaccatcaggagcgccagcagaagtcccgcgtgggggccccgacc
acccagacgatgcacgacaaggggctgacgaccacgatcgactggaaggacaaggacgcc
tacggtcggtcgatctcctcgaagaagcgaagccagatgcatcggcttcgcaagtggcag
gaacggatccggaccaaggacgccggcgaacgcaacctccaatttgccctctcggagatc
gaccgaatggcgagtgcgctcggggtcccacgatcggtacgcgaggtcgcctcggttatc
tatcgccgggcgctcaaggaggacctcattcgcggccgatcgatcgagggcgttgccacc
tcggccctgtacgcctcctgtcgcaaggaaggcatcccccgcagtctcgaggaaatctcg
gaggtctcgcgggtcgaacgcaaggagatcggtcggacgtatcggtatatttcacaggaa
ctcgggctggagatgaaacccgtcgatcccaagaagtacgtcccccggttctgttccgaa
ctcgaactctccgaagaagtccagtccaaagcaaacgagatcatcgagacgaccgccgag
aaagggttgctctccgggaaatccccgactggctacgccgccgccgcgatctatgccgcc
tcactgctgtgcaacgagaagaagacccagcgggaggtcgccgacgtcgcccaggtgacc
gaggtcacgatccggaaccggtaccaggagcagatcgaagcgatgggcatccacaactag

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