Halodesulfurarchaeum formicicum HSR6: HSR6_1603
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Entry
HSR6_1603 CDS
T04550
Symbol
rpoA2
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Pathway
hhsr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HSR6_1603 (rpoA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhsr03021
]
HSR6_1603 (rpoA2)
Enzymes [BR:
hhsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HSR6_1603 (rpoA2)
Transcription machinery [BR:
hhsr03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HSR6_1603 (rpoA2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
APE96044
UniProt:
A0A1J1AD16
LinkDB
All DBs
Position
complement(1541867..1543051)
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AA seq
394 aa
AA seq
DB search
MTTITDDIEALVEDSDLTRRLKDEVYETIEERSVSTEEAAQIVDAVEAQYVDTRVDPLDP
VGTVSAQSIGEPGTQMTMNTFHYAGVAEIDVTQGLPRLIELVDARKTPDTPMMTVHLDEE
YATDRDRAHEVVWQIEATKILALGDISTNVADMIVRIDLNEDTLEERWPTVPDTAEVAAE
IADVIRGELGVEVRRDGMILEFGPERPSYRELLQLVEQLRDVVFKGIEEVSRVVIRKEET
EKGEEFVLYTEGSAFKDVLDIEGVDASRTTCNNIHEIYEVLGVEAAREAIIEETRDTLEE
QGLGDVNIRHLMLVADIMTNEGTIESIGRHGISGNKKSVLARAAFEVTVNHLLDAAIHGE
VDDLDGVIENVIVGKPVKLGTGDVDLRMRASRSD
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgacgactattacagacgacatcgaggccctcgtcgaggattcggatctcacgcgccgc
ctcaaagacgaggtctacgagacgatcgaggaacgctccgtctccacggaggaggccgca
cagatcgtcgatgcggtcgaggcccagtacgtcgacacccgggtcgacccgctcgatccg
gtgggcaccgtctccgcccagtcgatcggggaacccggaacgcagatgacgatgaacacc
ttccactacgcgggcgtggctgagatcgacgtcacgcagggcctgccacgactgatcgaa
ctcgtggacgcccggaagaccccggataccccgatgatgaccgtccatctggacgaggag
tacgcgaccgaccgcgaccgggcccacgaggtggtctggcagatcgaggcgacgaagatc
ctcgcgctgggggacatctcgacgaacgtcgcggacatgatcgtccgcatcgacctcaac
gaggacacactcgaagagcgctggcccacggtgcccgacaccgctgaagtcgccgccgag
atcgccgacgtgattcggggcgaactcggcgtggaggtccgtcgcgacggcatgatcctg
gagttcggtcccgagcggccgagctaccgcgaactcctccagctcgtcgagcagcttcgg
gacgtggtgttcaaggggatcgaggaggtctcccgggtcgtcatccggaaggaggagacc
gaaaagggcgaggagttcgtcctctacaccgagggctcggcgttcaaggacgtcctcgac
atcgagggtgttgatgcctcccggacgacgtgtaacaacatccacgagatctacgaggtc
cttggcgttgaggccgcccgcgaggccatcatcgaggagacccgggacaccctcgaggaa
cagggccttggcgacgtgaacatccgccacctcatgctggtcgcggacatcatgaccaac
gaggggacgatcgagtcgatcggccgccacggcatctcgggcaacaagaagagcgtgctt
gcgcgggccgccttcgaggtgacggtgaaccaccttctcgatgcggccatccacggcgag
gtcgacgatctggacggcgtgatcgagaacgtcatcgtcggcaagccggtaaaactcggg
actggcgacgtcgacctgcggatgcgggcgagtcgctcggactga
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