Halodesulfurarchaeum formicicum HSR6: HSR6_1632
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Entry
HSR6_1632 CDS
T04550
Name
(GenBank) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Pathway
hhsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HSR6_1632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhsr03019
]
HSR6_1632
03016 Transfer RNA biogenesis [BR:
hhsr03016
]
HSR6_1632
03012 Translation factors [BR:
hhsr03012
]
HSR6_1632
04131 Membrane trafficking [BR:
hhsr04131
]
HSR6_1632
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hhsr04147
]
HSR6_1632
Messenger RNA biogenesis [BR:
hhsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
HSR6_1632
Transfer RNA biogenesis [BR:
hhsr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
HSR6_1632
Translation factors [BR:
hhsr03012
]
Eukaryotic type
Elongation factors
HSR6_1632
Membrane trafficking [BR:
hhsr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
HSR6_1632
Exosome [BR:
hhsr04147
]
Exosomal proteins
Proteins found in most exosomes
HSR6_1632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
RsgA_GTPase
Ras
FeoB_N
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
APE96072
UniProt:
A0A1J1AEB3
LinkDB
All DBs
Position
1575227..1576453
Genome browser
AA seq
408 aa
AA seq
DB search
MDHGKSTLVGRLLFETGSVPEHVIEQHREEAEEKGKGGFEFAYVMDNLAEERERGVTIDI
AHQEFETDTYNYTIVDTPGHRDFVKNMITGASQADNAVLVVAADDGVQPQTQEHVFLART
LGIEELIIGVNKMDLVDYEQNTYDETVEEVKGLLKQVQFDSDNASFIPISAFEGDNISEH
SENTPWYDGETILEALNGLPEPSPPTDAPLRLPIQDVYTISGIGTVPVGRVETGTMHPGD
MVSFQPSDVGGEVKTIEMHHEEVDMAGPGDNVGFNVRGIGKDDIRRGDVLGPADDPPTVA
ETFTAQIVVMQHPSVITAGYTPVFHAHTAQVACTIEEINKKIDPSSGQVEEENPDFIQSG
DAAVVTVRPQKPFSIEPSSEIPELGSFAVRDMGQTIAAGKVLSVTESE
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
gtggaccacgggaagagtacgctcgtgggccgactcctcttcgaaacggggagcgttccc
gagcacgtcatcgaacagcaccgagaagaagccgaagagaagggcaagggcggattcgag
ttcgcctacgtcatggacaacctcgccgaggagcgtgagcgtggggtcaccatcgacatc
gcccaccaggagttcgagacggacacatacaactacaccatcgtcgacacgccgggtcac
cgtgacttcgtgaagaacatgatcacgggggcctcccaggctgacaacgccgttctcgtc
gtcgcggcggacgacggcgtccagccgcagacccaggaacacgtcttcctggctcgcacc
ctcggtatcgaggaactcatcatcggcgtcaacaagatggacctcgtcgactacgagcag
aacacctacgacgagaccgtcgaggaagtcaagggactgctcaagcaggtccagttcgac
tcggacaacgcgagtttcatcccgatctcggccttcgagggcgacaacatctccgaacac
tcggagaacacgccgtggtacgacggcgagaccatcctcgaggcactcaacggcctgccc
gagccctcgccgccgacggacgcgccgctccgcctgccgatccaggacgtctacaccatc
tccggcatcgggacggtcccggtcggccgcgtcgagaccggtaccatgcaccccggtgac
atggtctccttccagccctccgacgtcggtggggaggtcaagaccatcgagatgcaccac
gaggaagtcgacatggccggccccggtgacaacgtcgggttcaacgtccgtggcatcggc
aaggacgacatccgccgcggtgacgtcctcggtcccgccgacgatccgcccacggtcgcc
gagaccttcacggcccagatcgtcgtgatgcagcatccgagtgtcatcactgccggctac
accccggtcttccacgcgcacacggcgcaggtcgcctgtaccatcgaggagatcaacaag
aagatcgacccgtcctcgggtcaggtcgaggaggagaaccccgacttcatccagtccggc
gacgccgcggtcgtcaccgtccgcccgcagaagccgttcagcatcgaaccgtccagcgaa
atccccgaactgggctccttcgcggttcgtgacatgggtcagaccatcgccgccgggaag
gtcctctccgtcaccgagtccgaataa
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