KEGG   Halodesulfurarchaeum formicicum HSR6: HSR6_1969
Entry
HSR6_1969         CDS       T04550                                 
Symbol
rpl40e
Name
(GenBank) 50S ribosomal protein L40e
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
hhsr  Halodesulfurarchaeum formicicum HSR6
Pathway
hhsr03010  Ribosome
Brite
KEGG Orthology (KO) [BR:hhsr00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    HSR6_1969 (rpl40e)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    HSR6_1969 (rpl40e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:hhsr03011]
    HSR6_1969 (rpl40e)
   04121 Ubiquitin system [BR:hhsr04121]
    HSR6_1969 (rpl40e)
Ribosome [BR:hhsr03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    HSR6_1969 (rpl40e)
  Archaea
    HSR6_1969 (rpl40e)
Ubiquitin system [BR:hhsr04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   HSR6_1969 (rpl40e)
SSDB
Motif
Pfam: Ribosomal_L40e Zn_Ribbon_1 DZR DUF6395 DZR_2 Cas12f1-like_TNB DUF6079_6th DHHC Zn_ribbon_3 Zn_ribbon_GTF2H2 Zn_ribbon_RPAB4 DUF7577
Other DBs
NCBI-ProteinID: APE96400
UniProt: A0A1D8S6T1
LinkDB
Position
complement(1925779..1925928)
AA seq 49 aa
MTQHLSIEDRLLGTQVCMRCNARNPERAERCRKCGYKNLRPKAKERRAT
NT seq 150 nt   +upstreamnt  +downstreamnt
atgacacagcacctctcgatcgaggaccggcttctgggcacccaggtctgcatgcggtgt
aacgcccgaaaccccgagcgtgccgagcgctgtcgcaagtgtggctacaagaacttgcgc
ccgaaggccaaggaacgccgcgcgacctaa

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