Halodesulfurarchaeum formicicum HSR6: HSR6_1969
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Entry
HSR6_1969 CDS
T04550
Symbol
rpl40e
Name
(GenBank) 50S ribosomal protein L40e
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Pathway
hhsr03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HSR6_1969 (rpl40e)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
HSR6_1969 (rpl40e)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hhsr03011
]
HSR6_1969 (rpl40e)
04121 Ubiquitin system [BR:
hhsr04121
]
HSR6_1969 (rpl40e)
Ribosome [BR:
hhsr03011
]
Ribosomal proteins
Eukaryotes
Large subunit
HSR6_1969 (rpl40e)
Archaea
HSR6_1969 (rpl40e)
Ubiquitin system [BR:
hhsr04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
HSR6_1969 (rpl40e)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribosomal_L40e
Zn_Ribbon_1
DZR
DUF6395
DZR_2
Cas12f1-like_TNB
DUF6079_6th
DHHC
Zn_ribbon_3
Zn_ribbon_GTF2H2
Zn_ribbon_RPAB4
DUF7577
Motif
Other DBs
NCBI-ProteinID:
APE96400
UniProt:
A0A1D8S6T1
LinkDB
All DBs
Position
complement(1925779..1925928)
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AA seq
49 aa
AA seq
DB search
MTQHLSIEDRLLGTQVCMRCNARNPERAERCRKCGYKNLRPKAKERRAT
NT seq
150 nt
NT seq
+upstream
nt +downstream
nt
atgacacagcacctctcgatcgaggaccggcttctgggcacccaggtctgcatgcggtgt
aacgcccgaaaccccgagcgtgccgagcgctgtcgcaagtgtggctacaagaacttgcgc
ccgaaggccaaggaacgccgcgcgacctaa
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integrated database retrieval system