Halodesulfurarchaeum formicicum HSR6: HSR6_1984
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Entry
HSR6_1984 CDS
T04550
Symbol
rpoE1
Name
(GenBank) DNA-directed RNA polymerase subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Pathway
hhsr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HSR6_1984 (rpoE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hhsr03021
]
HSR6_1984 (rpoE1)
Enzymes [BR:
hhsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HSR6_1984 (rpoE1)
Transcription machinery [BR:
hhsr03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HSR6_1984 (rpoE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-ProteinID:
APE96415
UniProt:
A0A1D8S6W6
LinkDB
All DBs
Position
1939177..1939749
Genome browser
AA seq
190 aa
AA seq
DB search
MYKRVRLTDTVEVPPEALDDVTPDLIKRLLQDKLEGRMDEEVGSIVTVTTVHDIGEGAVI
PNRPGVYYKAEFDALTFDPEMQEVVDGEVVEVVSFGAFVGIGPVDGLLHVSQISDEYLAF
DEEGQMLASRESNNTLGVGDAVRGRIVTKSIDERNPRESKIGLTAKQPGLGKHGWLREAR
QQEEAAAEGE
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgtacaagcgagtcagactcacagatacggtcgaagtgcccccggaggcgctcgacgac
gtcaccccggatctcatcaagcggctgctccaggacaaactggaggggcggatggacgag
gaggtggggtcgatcgtcacggtcacgactgtccacgacatcggcgagggtgcggtcatc
ccgaaccgaccaggtgtctactacaaggcggagttcgacgctctgaccttcgatccggag
atgcaggaggtcgtcgacggcgaggtcgtcgaggtcgtctccttcggtgccttcgtgggg
atcggcccggtcgacgggctgctccacgtctctcagatctccgatgaatacctggccttc
gacgaggagggccagatgctggcctcccgggagtcgaacaacaccctgggggtcggagac
gccgttcggggccgtatcgtcaccaaatcgatcgacgagcgcaacccgcgggagtccaag
atcggcctcaccgcgaaacagcccggcctcggcaagcacggctggctccgcgaggcccga
caacaagaagaggccgccgcggagggcgagtag
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