KEGG   Halodesulfurarchaeum formicicum HSR6: HSR6_2059
Entry
HSR6_2059         CDS       T04550                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
hhsr  Halodesulfurarchaeum formicicum HSR6
Pathway
hhsr03030  DNA replication
hhsr03410  Base excision repair
hhsr03420  Nucleotide excision repair
hhsr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hhsr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HSR6_2059 (dnaN)
   03410 Base excision repair
    HSR6_2059 (dnaN)
   03420 Nucleotide excision repair
    HSR6_2059 (dnaN)
   03430 Mismatch repair
    HSR6_2059 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hhsr03032]
    HSR6_2059 (dnaN)
   03400 DNA repair and recombination proteins [BR:hhsr03400]
    HSR6_2059 (dnaN)
DNA replication proteins [BR:hhsr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    HSR6_2059 (dnaN)
DNA repair and recombination proteins [BR:hhsr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     HSR6_2059 (dnaN)
   MMR (mismatch excision repair)
    Other MMR factors
     HSR6_2059 (dnaN)
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    HSR6_2059 (dnaN)
SSDB
Motif
Pfam: PCNA_N PCNA_C
Other DBs
NCBI-ProteinID: APE96488
UniProt: A0A1D8S710
LinkDB
Position
complement(2003213..2003956)
AA seq 247 aa
MFTAIVSAETLRTTLDSVSVLVDECKIHLTEDGLEIRAVDPANVGMVDLELEAAAFESYE
ADGGIIGVDLSRLEDIAGMADAGQLVQLELDEETRKLHIHIDGLEYTLALIDPDSIRQEP
DLPDLDLPARIVIEGRDIDRAVRAADMVSDHIALGVDTAAEHFYVDAEGDTDDVHLELGP
EDLISLELGEAHSLFSLDYLKDMNKAIPADGEVVVELGEEFPVKFHFDIAEGLGNVTYML
APRIQSE
NT seq 744 nt   +upstreamnt  +downstreamnt
atgtttacggccatcgtgagcgccgagacgctccggaccacactcgactccgtgagcgtg
ttggtggacgagtgcaagatccacctcaccgaagacggactcgaaatccgggcggtcgac
ccggcgaacgtgggcatggttgatctcgaactcgaggccgcggccttcgagtcctacgag
gcggacggcggaatcatcggcgtggacctctcgcgactggaggacatcgccggcatggcc
gatgccggccagctcgtccagctcgaactcgacgaggagacccggaaactccacatccac
atcgacggcctggagtacaccctcgcgctcatcgatcccgactccatccgccaggagccg
gacctccccgacctggaccttcccgcccgcatcgtgatcgagggccgggacatcgaccgc
gccgtacgagcggcggatatggtctccgatcacatcgcgctgggcgtggatacggccgcc
gagcacttctacgtcgacgccgagggcgacaccgacgacgtgcatctggaactcggtccg
gaggatctgatctccctggagctgggcgaggcccactcgcttttctcgcttgactacctc
aaggacatgaacaaggccatcccggccgacggcgaggtcgtcgtcgaactcggcgaggag
ttccccgtgaagttccacttcgacatcgccgagggcctgggcaacgtgacctacatgctc
gcgccccggatccagagcgagtag

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