KEGG   Halodesulfurarchaeum formicicum HSR6: HSR6_2086
Entry
HSR6_2086         CDS       T04550                                 
Name
(GenBank) replication factor C small subunit
  KO
K04801  replication factor C small subunit
Organism
hhsr  Halodesulfurarchaeum formicicum HSR6
Pathway
hhsr03030  DNA replication
Brite
KEGG Orthology (KO) [BR:hhsr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HSR6_2086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hhsr03032]
    HSR6_2086
DNA replication proteins [BR:hhsr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     HSR6_2086
SSDB
Motif
Pfam: Rep_fac_C AAA Intein_splicing Rad17 DNA_pol3_delta2 RCF1-5-like_lid AAA_assoc_2 DNAX_ATPase_lid AAA_16 NUMOD3 AAA_7 AAA_18 AAA_14 RuvB_N ResIII TIP49 nSTAND3 AAA_2 PhoH DUF3400 IstB_IS21 Mg_chelatase RNA_helicase AAA_5 AAA_19 PolC_DP2_central
Other DBs
NCBI-ProteinID: APE96514
UniProt: A0A1J1AEF2
LinkDB
Position
2028312..2030597
AA seq 761 aa
MTESAAGRDEIWVEKYRPERLDGVVGHEDIISRMQSYVERDDLPNLLFAGPAGTGKTATA
QAIAKELYGEDWQENFLELNASDERGIDVVRERIKDFARTSFGGYNYRIIFLDEADALCV
PPGTDVVTGYPSAPEVKPIEEVAKDGEPIPSVDFETNEVQSDKGKLVDSGVADFFEVELS
DGRDVLASLSHPFFVVGEDGTLVEKELQELSAGDRIADFKDDIGVSRCETCGDWTAGRFC
SVECKNEGHSQEMKGEDNPMYGTSWSDERREKIVEKLSDGRLEGENNPNYGGEFHGVSIW
EMDEESIEAFREKISERRSETTWEDWVVDADAEAVKEQIGRSSAAWWDSLDADEKERIVA
ETAESCDYPVCDISGDNNPMRDPEVAQKVSEALQGHPPTGGSNVRYSEELGHLVRSNWEY
EVAKALQDADVEYEYEPEFELSDSMFHPDFLVGETVIEVKGVAELWGQTEKVKEFLRTYG
EEYQFVVIGDEELPHHEHYTRDEFEPSLVADGGAQSVDTVEVSNIEYSHRGKAYNISMEG
TPNFMLGNGILTHNTSDAQSALRRTMEQFSKNTRFILSCNYSSKIIDPIQSRCAVFRFSP
IDDAAVIDRIREIAEIEGIEFTETGLEALAYAADGDMRRAINALQAAAASGGVVDEEAVY
AITSTARPEEIEAMIERALDGDFTGARARLVELITERGLAGGDIIDQLHRSVWEFDLDEA
AAVQLMDRLGEADYRISAGANEQVQLEALLASVALAANDQE
NT seq 2286 nt   +upstreamnt  +downstreamnt
atgacagagtccgcggccgggcgcgacgagatctgggtcgagaagtaccggcccgagcgc
ctggacggcgtggtcggccacgaggatatcatctcgcggatgcaaagttacgtcgaacgg
gacgatttgccgaacttgctctttgcggggccagccgggaccgggaaaacggcaacagcc
caggccatcgccaaagagctgtacggcgaggactggcaggagaacttcctcgaactcaac
gcctccgacgagcgcgggatcgacgtcgttcgcgagcggatcaaggattttgcccgcacc
tcctttggcgggtacaactatcggatcatcttccttgatgaggcagacgcgctttgtgtc
cctcccggtaccgacgtcgtcacagggtacccgtcagctccagaagtgaagcccatcgaa
gaggtggccaaagacggcgaaccgataccatcagtcgacttcgagacgaacgaggttcaa
tcagacaaggggaaactcgtcgactcgggcgttgcagacttcttcgaggtcgaactgtcc
gacgggcgggatgtcctagcgagtctcagccacccgttttttgtcgtcggagaagacggg
acactcgtcgagaaagaactccaagaactctcagcgggggaccggatcgccgacttcaag
gacgacatcggcgtttcgcgctgtgagacctgtggcgactggacggcgggacggttctgc
tcggtcgaatgtaagaacgaggggcacagccaggagatgaaaggggaggataaccccatg
tacggaacatcctggtcggacgagcgtcgggaaaaaatcgtcgaaaagctctctgatggc
cgactcgaaggcgaaaacaacccgaattacggcggtgagttccacggggtctctatctgg
gagatggacgaggagtccatcgaggcgttccgggagaagatcagtgagagacgatccgag
acgacctgggaggactgggtcgttgatgcggatgccgaagcggtcaaagaacagatcggc
cggtcctccgcagcgtggtgggacagccttgatgcggatgagaaagaacggatagttgcg
gaaacggccgagagctgtgactatccggtctgtgacatcagcggagataacaatccgatg
cgtgacccggaggtcgcacagaaggtctccgaggcgttacaaggccacccacccacgggg
gggtcgaacgttaggtacagcgaggaactcggccatctggttcggtcaaactgggaatac
gaagtcgccaaagcactacaggacgccgacgtagagtacgaatacgagccggagtttgag
ctgtccgattcgatgttccaccccgactttctcgtcggtgaaacagtcatcgaagtgaaa
ggagttgccgagttatggggccaaactgagaaggttaaggagttcctgcggacctacggt
gaggagtaccagttcgtcgtcatcggtgatgaagagctcccccatcacgaacattacacg
agggacgaattcgagccgtcacttgtcgccgatggtggtgcacaatcagtagacacagtc
gaggtgagcaatatcgaatatagccaccggggcaaagcctacaatatcagcatggagggg
acgcccaacttcatgctgggtaatggtatcttgacgcataatacctcggacgctcaatca
gcgcttcggcgcacgatggagcagttctcgaagaacacccgctttatcctctcctgtaac
tactcctcgaagatcatcgacccgatccagtcccgctgtgccgtcttccgattctcgccg
atcgacgacgcggcagtgatcgaccggatccgtgagatcgccgagatcgagggcatcgag
ttcaccgagacggggctggaggccctggcgtatgccgccgacggggacatgcgacgggcc
atcaacgccttgcaggccgccgcggcatcgggcggcgtcgtcgacgaggaggccgtctat
gcgatcacgagcaccgctcgcccggaggagatcgaggcgatgatcgagcgggccctcgac
ggggacttcacgggggcgcgggcgcggctggtcgagttgatcaccgaacgaggtctggcc
ggcggggacatcatcgatcagctccatcgctcggtctgggagttcgatctggacgaggcg
gccgccgtgcagcttatggatcggctgggcgaggccgattaccgcatcagtgccggggcc
aacgagcaggttcagctcgaagcgctgttggcctcggtcgcgctggccgccaacgaccag
gagtaa

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