Halodesulfurarchaeum formicicum HSR6: HSR6_2107
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Entry
HSR6_2107 CDS
T04550
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
hhsr
Halodesulfurarchaeum formicicum HSR6
Brite
KEGG Orthology (KO) [BR:
hhsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhsr03016
]
HSR6_2107
Enzymes [BR:
hhsr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HSR6_2107
Transfer RNA biogenesis [BR:
hhsr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HSR6_2107
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
LPD26
Motif
Other DBs
NCBI-ProteinID:
APE96535
UniProt:
A0A1J1AFT8
LinkDB
All DBs
Position
2047274..2047828
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AA seq
184 aa
AA seq
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MRLFVSVDLPTAFAEPIADLQAAFEGASGLDFTDPEQAHVTMKFLGDTDPDRVGEITTAL
ETAVETAGVGPFEATFEGLGVFPSMEYISVLWLGVGQGGEQFRALQAPIEERLVELGFEP
ETHDFTPHVTLARMKHAGGKELVQQLVREREPTVGTTTVEAVNLTESRLKSEGPVYETVE
RVEL
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgttcgtcagcgtcgacctgccgacagccttcgccgagccgatcgccgacctc
caggcggccttcgagggagcctccggactcgacttcaccgatcccgagcaggcccacgtc
acgatgaagttcctcggagacaccgatcctgaccgggtcggggagatcacgacggccctc
gaaaccgccgtcgaaacggcgggtgtggggccgttcgaggccaccttcgaggggttgggc
gtgtttccctccatggagtacatcagcgtgctctggctcggggtgggccagggtggcgag
cagttccgggcgttacaggccccgatcgaagagcggctggtcgagttgggcttcgaaccc
gaaacccacgatttcacgccccatgtcacgctggcgcggatgaaacacgcgggtggcaaa
gaactggtccaacaactggtgcgcgagcgagaaccgaccgtcgggacgacgaccgtggag
gccgtgaacctgaccgagagccggttgaaaagcgagggaccggtctacgagaccgtcgag
cgtgtcgagctctga
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