Herbaspirillum hiltneri: F506_00015
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Entry
F506_00015 CDS
T04039
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hht
Herbaspirillum hiltneri
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hht03032
]
F506_00015 (gyrB)
03400 DNA repair and recombination proteins [BR:
hht03400
]
F506_00015 (gyrB)
Enzymes [BR:
hht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
F506_00015 (gyrB)
DNA replication proteins [BR:
hht03032
]
Prokaryotic type
DNA Topoisomerases
F506_00015 (gyrB)
DNA repair and recombination proteins [BR:
hht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F506_00015 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AKZ61263
LinkDB
All DBs
Position
3036..5534
Genome browser
AA seq
832 aa
AA seq
DB search
MSQVPADNTVQPQQNQYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSI
DEALAGHCTEIHVTIHSDNSISVTDNGRGIPTGLKMDDKHEPKRSAAEIVMTELHAGGKF
DQNSYKVSGGLHGVGVSCVNGLSKLLRLTIRRDGKMYGMEFVRGIPQDRQIEVIDGVQVS
PIKVLGDTDKRGTEVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVHIKLTDQRTGKE
EDFAFEGGTRGFVEYINKNKSILNPTIFQATGERMSDQNTNISVDVSMQWNDAYNEQVLC
FTNNIPQRDGGTHLTGLRAAMTRVINKYIEENDFAKKAKVEVSGDDMREGLTCVLSVKVP
EPKFSSQTKDKLVSSEVRGPVEEIVAKTLTDFLQERPNDAKIICGKIVEAARAREAARKA
RELTRRKGVMDGLGLSAKLADCQEKDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRG
KVLNVEKARFEKMLSSEQITTLIATLGTSIGPDEFNADKLRYHRIIIMTDADVDGAHIRT
LLLTLFYRQMPQLVERGHIYIAQPPLYKVKAGKDERYLKDDVEEAHYMMQIALNDAELVP
SEGAAPISGAPLTELVRQYNTANAIIMRLTRMIDATALSAIMTGVTLQLNTAAEAEQSAA
ALKAAINEPGIDVIVRSDELTDKHILRIQRMYHGNIKVTAIDTDFVNGPDYQVLANAAAT
FRGLIGRGALIRRGTGDKIKESAISDFHQAMAWLRDEAERGVSKQRYKGLGEMNPEQLWE
TTMDPTVRRLLKVQIEDAIAADQIFMTLMGDDVEPRRAFIELNALQAGNIDV
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagtcccagcagacaacaccgttcaaccgcaacaaaatcaatatggagcctcc
tccatccagattctggaaggtttggaagccgtccgcaaacgccccggcatgtacatcggc
gacacctctgacggcaccggcctgcaccacctcgtgttcgaagtgctggacaactccatc
gacgaagcgctcgccggccactgcaccgaaatccacgtcaccatccactccgacaactcg
atctccgtcaccgacaacggtcgcggcatcccgaccggcctcaagatggacgacaagcac
gagcccaagcgctccgccgctgaaatcgtcatgaccgagctgcacgccggcggtaagttc
gaccagaactcctacaaggtctccggcggcctgcacggcgtgggcgtgtcctgcgtcaac
ggcctgtccaaactgctgcgcctgaccatccgccgcgacggcaagatgtacggcatggaa
ttcgtgcgcggcatcccgcaagaccgccagatcgaagtcatcgacggcgtccaggtctcc
ccgatcaaagtgctcggcgacaccgacaagcgcggcaccgaagtccatttctgggccgac
gaagaaatcttcacccacgtcgagttccactacgaaatcctggccaagcgcatccgcgaa
ctgtccttcctcaacaacggcgtgcacatcaagctgaccgaccagcgcaccggcaaggaa
gaagacttcgccttcgaaggcggcacccgcggcttcgtcgaatacatcaacaagaacaag
agcatcctcaacccgaccatcttccaggccaccggcgagcgcatgtcggaccagaacacc
aacatcagcgtcgacgtctccatgcaatggaacgacgcctacaacgaacaggtgctctgc
ttcaccaacaacatcccgcaacgcgacggcggcacccacctgaccggcctgcgcgccgcg
atgacccgcgtcatcaacaagtacatcgaagaaaacgacttcgccaagaaggccaaggtc
gaagtctccggcgacgacatgcgcgaaggcctcacctgcgtcctctccgtcaaggtcccc
gagccgaagttcagctcgcagaccaaggacaagctggtctcctccgaagtgcgcggcccg
gtcgaagaaatcgtcgccaagaccctcaccgacttcctgcaagagcgccccaacgacgcc
aagatcatttgcggcaagatcgtcgaagcagcccgtgcgcgcgaagcagctcgcaaggcg
cgcgaactgacgcgccgcaaaggcgtcatggacggcctcggcctctccgccaaactggcc
gactgccaggaaaaggatccggcgctgtgcgaactctacatcgtcgagggcgactccgcg
ggcggctcggccaagcaaggccgcgaccgtaaattccaggccatcctgccgctgcgcggc
aaggtcctcaacgtcgaaaaagcccgcttcgaaaagatgctctcctccgagcagatcacg
acgctcatcgccaccctcggcaccagcatcggcccggacgaattcaacgccgacaagctg
cgctaccaccgcatcatcatcatgaccgatgcggacgtcgacggcgcccacatccgcacg
ctgctgctcacgctgttctatcgccagatgccgcaactggtcgagcgcggccacatctac
atcgcccagccgccgctctacaaggtcaaggccggcaaggacgagcgctacctcaaggat
gacgtcgaagaagcgcactacatgatgcagatcgcgctcaacgacgccgagctcgtccca
agcgaaggtgcagcaccgatcagcggcgccccgctgaccgaactggtccgtcagtacaac
accgccaacgccatcatcatgcgcctgacgcgcatgatcgacgccaccgcgctgtcggcc
atcatgaccggcgtcacgctgcaactgaacaccgccgcagaagccgagcaatccgccgcc
gcactcaaggccgccatcaacgaaccgggcatcgacgtcatcgtccgctccgacgaactg
accgacaagcacatcctgcgcatccagcgcatgtaccacggcaacatcaaggtcaccgcc
atcgacaccgacttcgtcaacggccccgactaccaggtgctggccaatgcagccgcaacc
ttccgcggcctcatcggacgcggcgcactgatccgccgcggcaccggcgacaagatcaag
gaaagcgccatcagcgacttccaccaggccatggcatggctacgcgacgaagccgaacgc
ggcgtcagcaagcagcgctacaaaggtctgggtgaaatgaatccggaacagctgtgggaa
accacgatggacccaaccgtccgccgcctgctcaaagtgcaaatcgaagacgcgatcgcc
gcggatcagattttcatgacgctgatgggggatgacgtggaaccgcgcagggcgtttatt
gagttgaatgcgctgcaggctgggaatattgatgtttga
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