Herbaspirillum hiltneri: F506_00220
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Entry
F506_00220 CDS
T04039
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
K02054
putative spermidine/putrescine transport system permease protein
Organism
hht
Herbaspirillum hiltneri
Pathway
hht02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F506_00220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hht02000
]
F506_00220
Transporters [BR:
hht02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
F506_00220
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
HTH_8
Motif
Other DBs
NCBI-ProteinID:
AKZ61297
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Position
45766..47529
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AA seq
587 aa
AA seq
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MSSSLSPGAAKRAPRKRLPAWLPALPCFVFLICFFCVPVVEILQTGIVNADGHATLDQFR
RMTSDLVFAKVLGNTFLISGLTALLSVLLGFPVAYFLSQLSDRFRERWMIWIMVPFWTSY
LVKTFAWILVLSKTGILLTLAASLGLVDDPNALAPSMTGVMIGMVHAMLPLAVINMLPIM
RGVNAQLLQAAETLGANRSVAFFSVFLPMAAPGIAAAGLLVFITSLGFFILPALLGTPKE
TMVAQMVISAINDLFNLPYAAALSTVLLIFAVAVFILYDKLVGLSSLSGDTRAAPRKNSS
AVATALLIGIGRLCGSGYGAAGPVVRKVKGLKLYSVVAVALLSLPIIVVFPIAFTNSPFL
SFPPQGFSLRWFESFIFSPVWQASFLRSFGVAIVTALASTALGIGAALALTRLPPRWTKP
VFAFLLAPLIVPRIVVAVGLFYLFSRMGLVGTDLGLTIGHTVLAIPYVVVTMAAALKRFD
WRLDDAARILGASAFARLRTIQLPMMIGSVAAALQMAFIISFDELTIAIFVSGGMKNTLP
KQMWDDMILQVNPTLAAVSLVMVIVIALLILLPAFYKMARRRAHAAH
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtccagttcactctccccaggcgcggcgaaaagagcgccccgcaagcggttgccggcg
tggctgccggccctgccgtgtttcgtattcctgatctgcttcttctgcgtgccggtggtc
gagatcctgcagaccggcatcgtcaatgccgacggtcacgccacgctcgatcagtttcgc
cgcatgaccagcgatctggtgtttgccaaggtgctcggcaacaccttcctgatctcgggc
ctgacggcgctgctgtcggtgctgctgggctttccggtggcctacttcctgagccagttg
agcgaccgcttccgcgaacgctggatgatctggatcatggtgccgttctggaccagctac
ctggtcaagaccttcgcctggatcctggtgctgtcgaagaccggcatcctgctgacgctg
gccgccagcctcggcctggtcgacgatccgaatgcgctggcgccgtcgatgaccggcgtg
atgatcggcatggtgcatgccatgctgccgctggccgtgatcaacatgttgccgatcatg
cgcggcgtcaacgcgcagttgctgcaggcggcggagacgctgggcgccaaccgttccgtg
gcgttcttctcggtgttcctgccgatggccgctcccggcatcgcggcggcaggcttgctg
gtgttcatcaccagcctgggcttcttcatcctgccggcgctgctcggcacgcccaaggaa
accatggtcgcgcagatggtgatctcggcgatcaacgatctgttcaatctgccgtacgcg
gcggcgttgtcgacggttttactgatcttcgcggtggcggtgttcatcctctacgataag
ctggtgggtttgtcttcgctcagcggcgacacccgcgccgcaccaaggaagaacagttcg
gccgtcgccaccgcgctgctgatcggcatcggccgcctgtgcggcagcggctacggcgca
gccgggccggtggtgcgaaaggtgaagggactgaagctgtacagcgtggtcgcggtggcc
ttgctgtcgctgcccatcatcgtggtgttcccgatcgccttcaccaattcgccgttcctg
tcgttcccgccgcagggcttcagcctgcgctggtttgaatccttcatcttctcgccagtg
tggcaagcctcgttcctgcgctcgttcggtgttgcgattgtcaccgcgctggcatcgacc
gcgttgggcatcggcgccgcgctggcgttgacgcgcctgccgccgcgctggaccaagccg
gtgttcgccttcctgctggcgccgctgatcgtgccgcgcatcgtggtggcggtcggcctg
ttttatctgttctcgcgcatgggcctggtcggcaccgacctcggtctcaccatcggccac
accgtgctggccatcccgtatgtcgtggtcaccatggcggcggcgctcaagcgcttcgac
tggcgtctcgacgacgccgcccggattctcggcgcgtcggcgttcgcccggctgcgcacg
atccagttgccgatgatgatcggcagtgtggcggcggcgctgcagatggcgttcatcatt
tccttcgacgagctcacgatcgcgattttcgtcagcggcggcatgaagaacacgctgccc
aagcagatgtgggacgacatgatcctgcaggtcaatccgacgctggctgcggtatcgctg
gtcatggtgatcgtgatcgccctgctgatcctgctgccggcgttctacaagatggcgcgt
cgccgcgcgcatgccgcccactga
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