Herbaspirillum hiltneri: F506_01020
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Entry
F506_01020 CDS
T04039
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hht
Herbaspirillum hiltneri
Pathway
hht03420
Nucleotide excision repair
hht03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F506_01020
03430 Mismatch repair
F506_01020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hht03400
]
F506_01020
Enzymes [BR:
hht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F506_01020
DNA repair and recombination proteins [BR:
hht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F506_01020
MMR (mismatch excision repair)
Other MMR factors
F506_01020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AKZ65073
UniProt:
A0ABM5V675
LinkDB
All DBs
Position
224421..226718
Genome browser
AA seq
765 aa
AA seq
DB search
MQNLLHNLNAEQLAAVTLPAQSALILAGAGSGKTRVLTTRIAWLIQTGQVSPSGILAVTF
TNKAAKEMTARLSAMMPINTRGMWIGTFHGLCNRLLRAHHRDAALPQTFQILDSQDQLSA
IKRLLKQMNVDDEKYPPRNLMYFINGAKDQGLRAKDVEAHDDYNRKFVELYDLYDQQCQR
EGVVDFAELLLRTYELLSRNQPLREHYQRRFRHVLVDEFQDTNDLQYKWLKIMSGQGQVD
GGAVFAVGDDDQSIYAFRGANVGNMTAFEREFRVQNLIKLEQNYRSHGHILDAANILIAN
NSKRLGKNLRTDAGHGEQVRVFEASSDLQEAQWIIEQVKNLIAEGWARSEIALLYRSNAQ
SRVLEHALFSSAIPYRVYGGQRFFERAEVKHAIAYLQLMDNLHNDSAFLRVVNFPTRGIG
AKALEQLQDAARQYNCSLYAAVPYVAGKAGSTLNGFVKLIEAARFETQNLPLQEMVQVVL
DSSGLLTHYRNEKEGADRIENLEQLVSAATLFVSEEGYGLDAPAFLGPQAQAVAGTSITT
ADGIEIIDADAALTTIMSPLSAFLSHASLEAGDNQAQAGQDALQLMTVHSAKGLEFDAVF
ITGLEEGLFPHENSAKEEGGVEEERRLMYVAITRARKRLYMSFSQTRMLHGQTRYNMRSR
FFDELPDESIKWLSPKIQPQQHSWFAHPKSAWDAAPESGNNKIAQNFSRPDSGWRIGQNV
AHAKFGEGVIVNIEGGGGSTRAHINFGKFGMKLLDLSVAKLDKVG
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcttctccacaatctcaacgccgagcagcttgccgccgtcacccttcccgca
caatccgcactgatcctagccggcgccggttcgggcaagacgcgcgtgctgaccacgcgc
atcgcgtggctgatccagaccgggcaagtgtcgccttcgggcatcctggcggtgacgttt
accaacaaggcggccaaggaaatgaccgcgcgcctgtcggcgatgatgccgatcaacacg
cgcggcatgtggatcggcaccttccacggcctgtgcaaccgcctgctgcgcgcgcatcac
cgcgacgccgcgttgccgcagactttccagatcctcgactcgcaggatcaactgtcggcc
atcaagcgtctgctcaaacagatgaacgtggacgacgagaagtatccgccgcgcaatctg
atgtacttcatcaacggcgccaaggaccagggcctgcgcgccaaggacgtcgaggcgcat
gacgactacaaccgcaagttcgtcgagctctacgacctgtatgaccagcaatgccagcgc
gaaggcgtggtcgattttgccgagctgctgttgcgcacctatgaactgctgtcgcgcaac
cagccgttgcgcgagcattaccagcgccgcttccgccacgtgctggtggatgagttccag
gacaccaacgacctgcagtacaagtggctcaagatcatgtccggccagggccaggtcgac
ggcggcgcggtgtttgcggtgggcgacgacgatcagagcatctatgcattccgcggcgcc
aatgtcggcaacatgacggcgttcgagcgcgagttccgcgtgcagaacctgatcaagctg
gagcagaactaccgctcgcacggccacatcctcgacgccgccaacatcctgatcgccaac
aacagtaagcgcctcggcaagaatctgcgcaccgacgccggccatggcgagcaggtgcgc
gtgttcgaagcgagcagcgatctgcaggaagcgcaatggatcatcgagcaggtcaagaac
ctgatcgccgaaggctgggcgcgcagcgagatcgccttgctgtatcgttccaatgcgcag
tcgcgggtgctcgagcatgccttgttttcgtcggcgattccgtatcgcgtgtacggcggc
cagcgcttcttcgagcgtgccgaagtcaagcacgcaatcgcgtatctgcagctgatggac
aatctgcacaacgactcggcgttcctgcgcgtggtgaacttccctacgcgcggcatcggc
gccaaggcgctggagcaattgcaggatgctgcgcgccagtacaactgctcgctgtatgcg
gcggtgccttacgtggcgggcaaggccggttcgacgctcaacggtttcgtcaagctgatc
gaagccgcgcgttttgaaacgcagaatctgcccttgcaggaaatggtgcaggtggtgctc
gacagcagcggtttgctgacgcactaccgcaacgagaaagagggcgccgaccgcatcgag
aatctggagcagctggtcagcgccgcgaccttgttcgtctcggaagaaggctacggcctg
gatgcgcctgccttcctgggaccgcaggcgcaagccgttgccggcacgtccatcacgacc
gccgacggtatcgagatcatcgacgccgacgccgcgctgacgaccatcatgtcgcccctg
tcggccttcctctcgcatgcatcgctggaagccggcgacaaccaggcgcaggccgggcag
gatgctttgcaactgatgaccgtgcactcggccaagggactggagttcgacgcggtgttc
attaccgggttggaggagggcttgttcccgcacgagaacagtgccaaggaagagggcggc
gtggaagaagagcggcgcctgatgtacgtggccatcacgcgcgcgcgcaagcggttgtac
atgagtttttcccagacgcgcatgctgcatggccagacgcgttacaacatgcgctcacgc
ttctttgacgaactcccggacgagtccatcaagtggctttcgccgaagattcagccgcag
cagcacagctggtttgcgcatcccaagtcggcctgggacgctgcgccggaatccggcaac
aacaagatcgcacaaaacttttcgcggccggattccggatggcggatcgggcagaatgtg
gcgcatgccaagtttggcgagggggtgatcgtcaatatcgaaggcggcggggggagtacg
cgggcgcatatcaacttcgggaagttcgggatgaagttgctggatttgagtgtggcgaag
ttggataaggtggggtga
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