Herbaspirillum hiltneri: F506_02295
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Entry
F506_02295 CDS
T04039
Name
(GenBank) exodeoxyribonuclease
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
hht
Herbaspirillum hiltneri
Pathway
hht03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
F506_02295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hht03400
]
F506_02295
Enzymes [BR:
hht01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
F506_02295
DNA repair and recombination proteins [BR:
hht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
F506_02295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_coatGP8
Motif
Other DBs
NCBI-ProteinID:
AKZ61655
LinkDB
All DBs
Position
505455..505706
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AA seq
83 aa
AA seq
DB search
MPKNPVKASQPASFEEAMEELEQLVIQMEAGELPLEASVAAYKRGAELVKFCSVQLDKVD
SQVKVLEGDMLKPLAGELAEDEE
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagaatcccgtcaaagccagccagcccgcctctttcgaagaggccatggaagag
ctcgaacaactggtcatccagatggaagccggagaactgccgctggaagcctccgtcgcc
gcctacaagcgcggcgccgaactggtgaagttctgttccgtacaactcgacaaggtcgac
agccaggtcaaggtgctcgaaggcgacatgctcaagccgttggcgggcgaacttgcggag
gacgaagaatga
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