Herbaspirillum hiltneri: F506_02985
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Entry
F506_02985 CDS
T04039
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
hht
Herbaspirillum hiltneri
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hht01011
]
F506_02985
Enzymes [BR:
hht01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
F506_02985
Peptidoglycan biosynthesis and degradation proteins [BR:
hht01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
F506_02985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Motif
Other DBs
NCBI-ProteinID:
AKZ61767
LinkDB
All DBs
Position
671192..673144
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AA seq
650 aa
AA seq
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MQLKKCVLVITCAAAAALSFSLPAQAQKRLSATASSDDVFLALRDAARVDDSATALSLAA
RLPDYVIPSYVDYYRLKPRVRDFTAPVSEIRDFLNRYDGTAIGDRLRNDWLLALGKTGDW
STFDEQYPLFVLNDDVQVKCFALNSRALKGQNVADEARALLTSPKDYGQGCSDLIGTLAQ
NHQFGESDLWAQIRQAVEAGSIMVARRAAIFTDNGDLSLQQVIDKPAPLLARGPGQGRTA
HELYIIAVGRAAKNNPQQAAAFLSGASGLTAQEQAIAWAQVALPASMKLMPEAIDYWRKT
KDAPLSYEAYQWKVRIALRAGDWKLVKSTIESMPASLRSDITWTYWLARAQKEDGQLESA
QRLFQSIASNVSFYGQLATEELGQKIVIPPGPTPPTPAEIAPMAQNSGFKRALKFYELNM
RYEGIREWNWELRRMNDRQLLAAAEFARQSDVLDRMVNTSDRTKQEMDFTQRFPAPHLGE
MTANTRPLGLENAWVYGLIRQESRFIKNAKSYVGASGLMQLMPSTAKYVAKKIGMTEFTQ
DQINDINTNLLLGTSYLNMVLNNLDGSQALATAAYNAGPGRPRSWRSTLNRSVEGAIFAE
TIPFNETRGYVKNVMSNATYYAALFENKPQSLKQRLGVVAPRTNTPTDLP
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgcaattaaagaaatgcgtgctcgtgatcacatgcgctgctgcggcggcactcagtttt
tcgttgccggcccaggcccagaaacgtctttccgcgacggcttcatcggatgacgtcttc
cttgcgctgcgcgacgccgcgcgggtcgacgattcggccactgcgctcagcttggcggca
cggttgcccgattatgtcattccttcgtacgtcgactattatcggctgaaaccccgcgtg
cgcgacttcaccgcgccggtgtcggaaatccgcgacttcctgaatcgctacgacggcacc
gcgatcggcgaccgcctgcgcaacgactggctgttggcgctgggcaagaccggcgactgg
agcactttcgatgaacaatatccgttgttcgtgctcaacgacgacgtgcaggtcaaatgc
ttcgcgctcaattcgcgcgcactcaagggccagaacgtcgccgacgaagcgcgcgccctg
ctcaccagccccaaggattacggccagggttgcagcgacctgatcggcacgctggcgcaa
aaccatcagttcggcgaaagcgacctctgggcgcagatccgccaggcggttgaagccggc
agcatcatggtggcgcgccgcgccgcgatcttcaccgacaacggcgatctcagcctgcag
caagtgatcgacaagccggcgccgctgctggcgcgcggaccgggccagggccgtaccgcg
cacgagctgtacatcatcgccgtcggccgcgccgccaagaacaatccgcagcaggccgcg
gctttcctgagcggcgcctccggcctgactgcgcaggaacaggcgattgcctgggcgcag
gtcgccttgccggcgtcgatgaagctgatgccggaagcgatcgactactggcgcaagacc
aaggacgcgccgctgtcgtacgaggcctatcagtggaaagtgcggattgcgctgcgcgcc
ggcgactggaagctggtgaagtccaccatcgaatccatgccggcttcgctgcgcagcgac
atcacctggacctactggctggcgcgtgcccagaaggaggacggccagcttgaatcggcg
cagcgcctgttccaatcgattgcctcgaacgtcagcttctacggccagctggccaccgaa
gagctgggccagaaaatcgtgatccctcccggcccgacaccgccgacgccggcagagatc
gcaccgatggcgcagaacagcggcttcaagcgcgcactcaagttctatgagctcaatatg
cgttacgaaggcatccgtgaatggaactgggaactgcgccgcatgaacgatcggcagttg
ctcgccgccgccgaattcgcgcgccagagcgacgtgctcgatcgcatggtgaacacctcg
gaccgcaccaagcaggaaatggattttacccagcgtttcccggcgccgcacctgggtgaa
atgaccgccaacacgcgtccgctcggactggaaaacgcctgggtctatgggctgatccgc
caggaatcgcgtttcatcaagaacgccaaatcctatgtcggcgcgtccgggctgatgcag
ctgatgccgtcgactgcgaagtacgtcgccaagaagatcggcatgaccgagttcacgcaa
gaccagatcaacgacatcaacaccaacctgttgctcggcaccagctatctgaacatggta
ctcaacaatctcgacggctcgcaggcattggcgacggccgcctataacgccggcccggga
cgtccgcgcagctggcgctcgacgctgaaccgcagtgtcgaaggcgcgatcttcgccgag
acgattccgttcaacgagacgcgcggctacgtcaagaacgtgatgtccaacgccacttat
tacgccgccctgttcgagaacaagccgcagtcgctcaagcagcggctcggcgtggtggcg
ccgcgcaccaatacaccgaccgacctgccctga
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