Herbaspirillum hiltneri: F506_03915
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Entry
F506_03915 CDS
T04039
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hht
Herbaspirillum hiltneri
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hht03016
]
F506_03915
Transfer RNA biogenesis [BR:
hht03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
F506_03915
Prokaryotic type
Methyltransferases
F506_03915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
AIG1
Ras
MCM
Roc
Motif
Other DBs
NCBI-ProteinID:
AKZ65138
LinkDB
All DBs
Position
855082..856488
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AA seq
468 aa
AA seq
DB search
MTLDTSPIAAIATAPGRGGIGVVRLSGKNLWPVVQAVCGKDEGTLAPRHACYLPFRRADG
SLIDQGLAIYFKAPHSYTGEDVLELQGHGGPVVMQMLLARCLEAGADIGLRLAEPGEFTQ
RAFLNDKLDLAQAEAVADLIEASTEAAAKSASESLSGAFSKVIHDLVNKVTNLRMLVEAT
LDFPEEEIDFLEQSDARGQLAAIRATLDDVFMHASQGALLRDGLNVVLAGKPNVGKSSLL
NILAGSDVAIVTPIAGTTRDKVTETIQIEGMPLNIIDTAGIREADEDGSGPDEVERIGIE
RTWGEVARADVILHMLDADRGPTVEDEKITERFPDGVPVIRIWNKIDRSGHKPAVDKMTD
ATHIYLSATDQVGIDLLRGELLRIAGWQQTVESRYLARERHLIALKAARDYLESAALHAA
VDNQASDKSLDLFAEELRLAQERLSSITGKFTPDDLLGVIFSRFCIGK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgactctcgatacttctcccatcgccgcgatcgccaccgccccaggacgcggcggcatc
ggcgtggtccgtctttcaggcaagaacctgtggccggtggtgcaagctgtctgcggcaag
gatgaaggcacgctggcgccgcgccatgcctgctatttgccgttcaggcgcgccgatggc
agcctgatcgatcagggcctggcgatctacttcaaggcgccgcattcctacaccggcgaa
gacgtgctcgaactgcaaggccatggcggcccggtggtcatgcagatgctgctggcgcgc
tgcctcgaagccggcgccgacatcggcctgcggctggccgagccgggggagttcacccag
cgcgctttcctcaacgacaagctcgacctggcgcaggccgaagcggtcgccgatctcatc
gaggcgtccaccgaagcggccgccaagtcggcctccgaatcgctgtcgggcgcgttctcc
aaagtcattcacgacctggtgaacaaggtcaccaacttgcgcatgctggtcgaagcgacg
ctggattttcccgaagaagaaatcgacttcctcgagcagtccgacgcgcgcggccaactc
gccgcgatccgcgccacgcttgacgacgtcttcatgcacgcgtcgcaaggcgcgctgctg
cgcgacggcctcaacgtcgtgctggccggcaagcccaacgtcggcaagtcgtcgctgctc
aatatcctggccggctccgatgtcgccattgtcacgccgatcgccggcaccacgcgcgac
aaggtcaccgagaccatccagattgaaggcatgccgctcaacatcatcgacaccgccggt
atccgcgaagccgatgaagatggcagcggtcccgacgaagtcgaacgcatcggcatcgaa
cgcacctggggtgaagtcgccagggccgacgtcatcctgcacatgctcgacgccgatcgg
gggccgaccgtggaagatgaaaaaatcaccgagcgcttccccgacggcgtgccggtcatc
cgcatctggaacaagatcgatcgctccggccacaagcccgcagtcgacaagatgacggat
gccacgcacatttacctgtcggccaccgaccaggtcggcatcgacctgctgcgcggcgaa
ttgttgcgcatcgccggctggcagcaaacggtggagtcgcgctatctcgcgcgcgaacgc
catctgatcgccctgaaggccgcgcgcgactatctggaaagcgccgccctgcacgctgcg
gtcgacaaccaggccagcgacaagtctctggatttgtttgcggaagaactgcgcctggcg
caggagcgtttaagcagcatcaccggcaagttcacgccggacgatttgctgggcgtgatt
ttctcgcgtttctgcatcggaaaataa
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