Herbaspirillum hiltneri: F506_04800
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Entry
F506_04800 CDS
T04039
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
hht
Herbaspirillum hiltneri
Pathway
hht02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F506_04800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hht02000
]
F506_04800
Transporters [BR:
hht02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
F506_04800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
SBP_bac_6
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
AKZ62079
UniProt:
A0ABN4HRE8
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All DBs
Position
complement(1062379..1063437)
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AA seq
352 aa
AA seq
DB search
MTQQFNNHRRTVLKMAGGIAAAGIAPSILAQTRQLVVADPGGPYTAAYRKAFYDPFEKAT
GVKIVNVAREAQPVAQLTAMVQTKNFVWDVTTLTLAQDIPILEEAGMLEPLGIVPTDFKN
MLPGSITSSFVGVDVYATILAYRTDKFAKNPPKTWADFWNVEKFPGRRSLRRNAIDTLEQ
ALMADGVAPDKLYPLDLDRAFKSLDRIKKHVAVWWTSGAQAMQLIQSGEVDMISTWNARA
QTAIEGGAPVAINWNQGLYSIEGWGVPKGNPRAAVAKEFVKFCADAKRQSGFTDTLAYGP
TALEAYKDIPAARAAILPTAPANIALMRPPSGPWWHKNRNAVSDRFNAWLLS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgactcagcaattcaacaaccatcgccgcaccgtcctgaaaatggccggcggtattgcg
gctgccggcattgcgccgtcgatcctggcgcaaaccaggcaactggtggtcgccgacccg
ggcggtccttacacggccgcctatcgaaaggccttctacgatccgtttgaaaaagccacc
ggcgtgaagatcgtcaacgtcgcccgcgaagcacagccggtcgcgcaactgaccgccatg
gtgcagaccaaaaacttcgtgtgggacgtcaccacgctgacgttggcgcaggacattccg
attctcgaagaagccggcatgctggagccgctcggtatcgtgccgaccgacttcaagaac
atgctgcctggttcgatcacatcaagcttcgtcggcgtcgacgtgtacgcgaccatcctg
gcctaccgcaccgacaagttcgccaagaatcctccaaagacctgggccgacttctggaac
gtcgagaaattcccgggccgccgctcgctgcgccgcaatgccatcgacaccctggagcaa
gcgctgatggccgacggcgttgcacccgacaaactgtacccgctcgatctggatcgcgcc
ttcaagagcctcgatcgcatcaagaaacacgtcgcagtctggtggaccagcggcgcccag
gcgatgcagctgattcaatccggcgaagtcgacatgatctcgacctggaatgcacgcgcg
cagaccgccatcgaaggcggcgcaccggtggcgatcaactggaaccagggtttgtattcg
atcgaaggctggggcgtgccgaagggcaatccgcgcgccgccgtagcgaaggagttcgtc
aaattctgtgccgacgccaagcgccagagcggcttcaccgacacgctggcgtacggcccg
accgcgctggaagcctacaaggacatccccgctgcacgcgccgccatcctgccgaccgca
cccgccaacatcgccctgatgcgtccgcccagcggcccgtggtggcacaagaaccgcaac
gcggtatcggaccgtttcaacgcctggttactttcctga
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