Herbaspirillum hiltneri: F506_05160
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Entry
F506_05160 CDS
T04039
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
hht
Herbaspirillum hiltneri
Pathway
hht02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F506_05160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hht03021
]
F506_05160
Transcription machinery [BR:
hht03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F506_05160
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
PhyR_sigma-like
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AKZ62137
UniProt:
A0ABN4HU18
LinkDB
All DBs
Position
complement(1144297..1144803)
Genome browser
AA seq
168 aa
AA seq
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MAATDSSLLQVQTLYSHHGWLLGWLRRRTGNPELAADLAQDTFLRIMVSRRDFYLDEARA
LLATIARGLVIDHFRRCALEAAFLEMLAQLPPEHVPSPEARLAVLETLNQVDAMLAALPA
KVRSAFLLSQLDGLGYAEIAVRLDVSLSSVQQYMKRAFTACYRVQYGD
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaccgattcgtcactgctgcaggtgcagacgctgtacagccatcacggctgg
ctgctgggctggctgcggcgccgcaccggcaatccggaactggcggccgacctggcccag
gacactttcctccggatcatggtgtcgcgccgcgacttttacctggacgaagcgcgcgcc
ttgctggcgaccatcgcccgcggcctggtgatcgatcatttccgccgctgcgcgctggaa
gccgccttcctcgagatgctggcgcaattgccgcccgaacacgtgccttctcccgaggcg
cggctggccgtgctggaaaccctcaaccaggtcgatgccatgctggccgcgctgccggcc
aaggtgcgcagcgccttcctgctgtcgcagctggatggcctgggctatgccgagatcgcc
gtccgtctggacgtgtccctgagttcggtgcagcaatacatgaagcgtgccttcaccgct
tgttatcgcgtgcagtatggcgactga
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