Herbaspirillum hiltneri: F506_05730
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Entry
F506_05730 CDS
T04039
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
hht
Herbaspirillum hiltneri
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hht03009
]
F506_05730
Enzymes [BR:
hht01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
F506_05730
Ribosome biogenesis [BR:
hht03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
F506_05730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AKZ62231
LinkDB
All DBs
Position
1270403..1272376
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AA seq
657 aa
AA seq
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MKPSSSNDDQQIDLPGAADATAAKPVRKRTKKVAAEEVVAEVADAAPAVKPARAPAKPRA
KKVAAEAPAETAAAAPATVEAAADAPAPKKRAPRVKKVVADADAGSAAVVESAPQAAEAP
KVIVTIGEEITAAPVLLDAPTDSARTKPARRGVRGPRALRNNRAAQRAAEAGEGEQHHAV
AGEEQAIPADANAPVPVADQAMAESRRDGQGQDRNRQQKGKKPFAKGGKPKAPQLGLRAH
DAGDDVFSFVTSDAYDKEDGARSGARGTHQLRGKNGRRDLTSEDDAPKLHKVLADSGLGS
RRDMEELIVAGRVSVNGEPAHIGQRILPTDQVRINGKLLQRKVSKKPPRVLVYHKPAGEI
VSHNDPEGRASVFDRLPNMKAAKWLAVGRLDFNTEGLLLFTTSGDLANRLMHPRYNIERE
YAVRTLGELEQGMRQKLLHGVELDDGMAQFSKIADGGGEGVNKWYRVTIGEGRNREVRRM
FEAIGLTVSRLIRTRYGVMSLPQGLKRGRWEELEENAVRSLLAVCGMEKQGGADAPAGKS
KGNGNGNRSGNGDAQPRSNANANPMQPRGPRRDQQPSWQGQGQGARQGQGQGSRQGQGQG
GRPQGNKPRQPDPLQTALGFPDAGQRRHNRPQRNGGGGGGMSGQGMGTGGLPRRRRG
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatctagttccaatgatgatcagcagatagacctgcccggcgccgctgacgcc
actgctgccaagccggtccgcaagcgcaccaaaaaggtcgcggcggaagaagtcgtcgcc
gaagttgccgacgctgctccggcggtgaagcctgccagggcgcctgccaaaccgcgcgcc
aaaaaggtcgctgcggaggccccggctgaaacggccgcagccgcaccggccacagtggaa
gccgccgccgatgcgcctgcgccgaagaagcgtgcgccgcgcgtcaagaaggtggtcgcc
gatgctgatgccggttcggccgctgtcgtcgagtctgctcctcaggctgcagaagcgccc
aaggttatcgtcaccattggcgaagaaattaccgccgcgccggtcctgcttgatgcgccg
accgacagcgcacgcaccaagcctgcacgccgcggcgtacgcggtccgcgcgcattgcgc
aacaatcgcgctgcacagcgcgccgctgaagctggcgaaggtgagcagcaccacgcagtt
gccggcgaagagcaggcaatcccggcggatgccaacgcgccggttccggtcgccgaccag
gccatggcggaatcgcgccgcgacggtcagggccaggatcgcaatcgccagcaaaaaggc
aagaaaccattcgccaagggtggcaagccgaaagcgccgcaactgggtttgcgtgcgcat
gacgccggcgacgacgtgttttcgttcgtcacctccgacgcctacgacaaggaagacggc
gcccgcagcggcgcgcgcggcacgcatcagctgcgcggcaagaacggtcgccgcgacctg
acttcggaagacgacgcacccaagctgcacaaggtgctggccgactccggtctcggttcg
cgccgcgacatggaggagctgatcgtggccggccgcgtgtcggtcaacggcgagcctgcc
cacatcggtcagcgcattctgccgaccgaccaggtccgtatcaacggcaagttgctgcaa
cgcaaagtcagcaagaagccgccgcgcgtgctggtgtatcacaagccggccggcgaaatc
gtcagccacaacgacccggaaggccgcgcctcggtattcgatcgcctgccgaacatgaag
gcagccaaatggctggccgtcggccgtctcgacttcaacaccgaaggtttgctgttgttt
acgacttccggcgacctggccaaccggctgatgcacccgcgttacaacatcgagcgcgaa
tacgccgtacgcacgctgggcgaactggaacaaggcatgcgccagaaactgttgcacggc
gtcgagctcgatgacggcatggcgcagttttccaagatcgccgacggcggcggcgaaggc
gtcaacaagtggtaccgcgtgaccatcggcgaaggccgcaatcgcgaagtgcgccgcatg
ttcgaagccatcggcctgaccgtgtcgcgcctgatccgcacccgctacggcgtcatgtcg
ctgccgcaaggtctcaagcgcggccgttgggaagagctggaagaaaacgccgtgcgcagc
ctgttggcagtgtgcggcatggaaaagcaaggcggcgccgatgcgcccgctggcaagtcc
aaaggcaatggcaatggtaatcgtagcggcaacggtgatgctcagccgcgcagcaacgcc
aacgccaatccgatgcagccgcgcggtccgcgccgcgatcagcaaccgtcctggcaaggc
caggggcagggggcgcgccaaggccaaggtcagggttcgcgccaggggcaaggccagggc
ggacgtccgcagggcaacaagccgcgtcagccggatccgctgcagaccgcactgggtttc
ccggacgccggccagcgtcgccataatcgtccgcaacgcaacggcggcggcggtggcggc
atgtccgggcaaggcatgggcacgggcggcctgccgcgtcgccggcgcggataa
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