Herbaspirillum hiltneri: F506_05755
Help
Entry
F506_05755 CDS
T04039
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hht
Herbaspirillum hiltneri
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hht03016
]
F506_05755 (truB)
Enzymes [BR:
hht01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
F506_05755 (truB)
Transfer RNA biogenesis [BR:
hht03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F506_05755 (truB)
Prokaryotic type
F506_05755 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AKZ62236
LinkDB
All DBs
Position
1278214..1279167
Genome browser
AA seq
317 aa
AA seq
DB search
MAHSSPQPSRPPRAPRVPVHGVLLLDKPVGWSSNDALIKAKRLLNALKAGHTGTLDPFAT
GLLPLCFGEATKFSQDLLEADKTYEAVVHFGIVTNTGDTEGEVLSTKAVDVTPEQIEAVL
EKFRGPIAQVPPMHSALKRDGKPLYEYARAGIMLEREARQVTIHQLELLSYEAPFLRIRV
LCSKGTYIRVLGEDIGAALGCGAHLNQLRRTGVGALTLDGSVTLDEFIALEDGQRTQALL
PVDGLLTTFPAVMLTDVLTQRFLHGQRLALGKEGVALPAESGRARVYQESSGRLLGTGLM
QEFGILAPERLISTLSE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcgcactcatcgccccaaccatcccggccgccacgagcgccgcgcgtgcctgtgcat
ggcgtgctgctgctggacaagccggtgggctggtccagcaacgatgcgctgatcaaggcc
aagcgcctgctcaacgccctgaaagcggggcataccggcacgctcgacccgttcgcgacc
ggtttgctgccgctctgttttggcgaggcaaccaagttttcgcaagatttgctggaagcc
gacaagacttatgaagccgtggtccacttcggcatcgtcaccaacaccggcgacaccgaa
ggcgaagtactgagcaccaaggcagtcgacgtcacgccggagcagatcgaagccgtgctg
gaaaaattccgcggtccgatcgcccaggtgccgcccatgcattccgcgctcaagcgcgac
ggcaagccgctgtacgaatatgcgcgcgccggcatcatgctggagcgcgaggcgcgccag
gtgacgatccatcagctggaactgctgtcgtacgaggcgccgttcctgcgcattcgcgtg
ttgtgcagcaagggcacttacatccgcgtgctcggcgaagatatcggcgccgcgctcggt
tgcggcgcgcatttgaatcagttgcgccgcaccggcgtcggcgcattgacgctggacggc
agcgtcacgcttgatgagttcatcgcgctggaagacggccaacgcacgcaggcattgttg
ccggtggatggtttgctgacgacgtttccggcggtgatgctcacggatgtgctgacgcag
cgcttccttcacgggcagcgcctggcgctcggcaaggaaggtgtcgcattgcccgcagag
tcaggccgggcaagggtttatcaggaaagcagcgggcgccttctgggcaccggactgatg
caggaattcggcatactggcgccggaacggctgatttcgacattgtcggagtag
DBGET
integrated database retrieval system
