Herbaspirillum hiltneri: F506_07445
Help
Entry
F506_07445 CDS
T04039
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
hht
Herbaspirillum hiltneri
Pathway
hht03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
F506_07445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hht03400
]
F506_07445
Enzymes [BR:
hht01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
F506_07445
DNA repair and recombination proteins [BR:
hht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
F506_07445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AKZ62534
LinkDB
All DBs
Position
complement(1659963..1660550)
Genome browser
AA seq
195 aa
AA seq
DB search
MKPSLTVDSPLPDILAAGLDVIFCGINPGMRAAASGHHFMGRSNRFWKTVHLSGFTPELI
DPLDDRNILGHRCGLTTVVERPTARADEVLRDEFIRSAATLCQKVELLRPRCLAFLGKPA
YQAITGKPKVEWGKQPEAFGGAMVWLLPNPSGLNRGFSQDMLVQAYRELREALAENVPIM
SGESRSALAEAALDR
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaagcctcaccgttgactcccctcttcccgatatcctggccgcgggtctcgac
gtcattttctgcggcatcaatcccggcatgcgcgcagcggcgagcggtcatcatttcatg
ggcaggagcaatcgtttctggaagaccgtgcatctctcgggcttcacgcctgaactcatc
gatccgctcgatgaccgcaacattctcggccatcgctgcggcctgacgaccgtggttgaa
cgtccgactgcacgcgccgacgaggtgctgcgcgatgagttcattcgttccgccgcaacg
ctgtgccagaaggtagaactgctcaggccgaggtgcctggccttcctcggcaaaccggcc
tatcaggccatcacggggaaaccgaaagtcgaatggggcaaacagccggaggcattcggc
ggcgccatggtgtggctcttgccgaaccccagcggactgaatcgcggattcagccaggac
atgctggtgcaggcttatcgggagttgcgcgaggcgctcgcagagaacgttccgatcatg
tccggagaaagtcgttcagcccttgccgaagcggcgcttgatcggtga
DBGET
integrated database retrieval system
