Herbaspirillum hiltneri: F506_08015
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Entry
F506_08015 CDS
T04039
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hht
Herbaspirillum hiltneri
Pathway
hht03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
F506_08015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hht03400
]
F506_08015
Enzymes [BR:
hht01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
F506_08015
DNA repair and recombination proteins [BR:
hht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
F506_08015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AKZ65230
UniProt:
A0ABN4I2H6
LinkDB
All DBs
Position
complement(1778760..1780133)
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AA seq
457 aa
AA seq
DB search
MNHDDFSSPAPSAPPSGPPVLAVSALNQAVARVLERTFPLVWVSGEISNFTRAASGHWYF
TLKDDAAQVRAVMFKGRAQHAGFSPREGDKVEVRTLVTLYAPRGDYQLNVEAIRRAGVGN
LYEAFLRLKEKLESEGLFHPDRKRPLPVFPRCVGVVTSPHAAALHDILTALRRRAPHVRV
ILYPTPVQGEGAGAKIARAIEVASRRAECDVLLVGRGGGSMEDLWAFNDEAVARAIAACP
VPVISGVGHETDFTIADFAADLRAPTPTAAAELCATPRAEWLAQVQNHAADLTRALRRRL
AEHGQTVDWMSRRLVSPASYIAHERVKLRALQARLEHATRTPVTRARYQLQHLQTRLQNR
LPDTRAARLLLGGHQRRIGNAVALQVQRQRQALAAQSSQLELLNPQRTLERGYAIVTDAK
GKVLRAPSELQPRSNVTLRLAEGSAEVGIASVQPTLD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacgacgatttttccagccctgcgccttccgctccgccatccggcccgcccgtg
ctcgccgtatcggcgctcaaccaggcggtcgcgcgcgtgctggagcgaacctttccgctc
gtctgggtgtccggcgaaatatccaattttacccgcgctgcgtccggccattggtatttc
acgctgaaagatgacgccgcccaggtgcgcgccgtgatgttcaagggccgcgcccaacat
gccggcttctcgccgcgcgaaggcgacaaagtcgaagtgcgcacgctggtcacgctgtat
gcgccgcgcggcgactaccagctcaacgtcgaggccatccgccgcgccggcgtcggcaat
ttgtatgaagccttcctgcgcctcaaggaaaagctcgagagcgaaggcctgttccatccc
gaccgcaaacgtcccctgccggtcttcccgcgctgcgtcggcgtcgtcaccagtccgcac
gcggcggcgctgcacgacatcctgaccgcgctgcgtcgccgcgcgccgcacgtgcgcgtg
atcctgtatccgacgccggtgcagggcgaaggcgccggcgcgaagattgcacgcgccatc
gaggtggcgtcccggcgcgccgaatgcgatgtgctgctggtcggtcgcggcggcggcagc
atggaagatctgtgggccttcaacgatgaagccgtggcgcgcgcgatcgcggcgtgtccg
gtgccggtgatttccggcgtgggacacgagaccgatttcacgatcgccgatttcgccgcc
gacctgcgcgcgccgaccccgaccgccgcagccgagctgtgcgcgacgccacgcgccgaa
tggctggcgcaagtgcagaatcacgccgccgacctcacccgcgcactccggcgccgcctt
gccgaacacggccagaccgtcgactggatgtcgcgccggctggtcagcccggcctcttac
atcgcccacgaacgcgtcaagctgcgcgcgctgcaagcccgtctcgagcacgccacgcgc
acgccggtcacgcgtgcgcgctatcagttgcagcatctgcagacacgcctgcagaatcgc
ctgccagacacgcgtgccgcgcgcctgctgctgggcggccatcagcgccgcatcggtaac
gccgtcgcgctgcaggtgcaacggcaacgccaggcgctcgcggcgcaatcgtcgcagctc
gaactgctcaatccgcagcgcaccctcgagcgcggctacgccatcgtcaccgacgccaaa
ggcaaggtgctgcgcgcgccttccgaattgcaaccgcgcagcaatgtcacgctgcgactg
gccgagggcagcgccgaggtcggcatcgcgagcgtgcagccgacgctggattga
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