Herbaspirillum hiltneri: F506_08650
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Entry
F506_08650 CDS
T04039
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hht
Herbaspirillum hiltneri
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hht03016
]
F506_08650
Enzymes [BR:
hht01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
F506_08650
Transfer RNA biogenesis [BR:
hht03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F506_08650
Prokaryotic type
F506_08650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AKZ65249
LinkDB
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Position
1924026..1924847
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AA seq
273 aa
AA seq
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MHRIVLGIQYDGNSWQGWQTQPHGLTVQDKLEAALRKFTLADIGTTCAGRTDSGVHALEQ
VVHFDTVIARETASWVRGVNAFLPPSIAVRWACEVPLEEGVGINAGEREDGFHARFSATA
RTYHYVLYNHPVRSPLLAGKAGWTFRPLDAGLMQQGADYLIGMHDFSSFRAVECQAKSPV
RTMESLQVRRHGDMIVFTLKANAFLHHMVRNIVGSLIYVGNGRQQPQWIAEVLAQKDRGC
AAPTFMPDGLYLAKVDYPSRWQLPQEARAWPWL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
ttgcatcgcatcgtgctcggcatccagtacgacggcaactcctggcagggttggcagacc
cagccccacgggctgaccgtgcaggacaagctggaagccgcactcaggaaattcacgctg
gccgacatcggcaccacctgcgcgggtcgcaccgattccggcgtgcatgcgctggaacag
gtggtgcatttcgacactgtcattgcgcgcgaaacagcctcatgggtgcgcggcgtgaac
gccttcctgccgccatcgatcgccgtgcgctgggcctgcgaagtgccgctggaagagggc
gtcggcatcaatgcgggggagcgcgaagacggtttccacgctcgtttcagcgccacagcg
cgcacctatcactatgtcttgtacaaccacccggtgcgctccccgctgctggcgggcaag
gccggatggacgttccgcccgctcgacgccggcctcatgcagcaaggcgcggattacctg
atcggcatgcatgatttttcgagttttcgcgcggttgaatgccaggccaagtcgccggtg
cgcacgatggagtcgctgcaggtgcgccgccacggcgacatgatcgtcttcacgctcaag
gccaatgccttcctgcatcacatggtgcgcaatatcgtcggttcgctgatttatgtcggc
aacggcaggcagcaaccgcagtggatcgccgaggtgctggcgcaaaaggaccgcggctgc
gccgcgcctactttcatgccggacggcctgtatctggccaaagtggactatccttcgcgc
tggcagcttccgcaggaagcccgcgcctggccctggctgtag
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