KEGG   Herbaspirillum hiltneri: F506_10100
Entry
F506_10100        CDS       T04039                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
hht  Herbaspirillum hiltneri
Pathway
hht03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hht00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    F506_10100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hht03400]
    F506_10100
DNA repair and recombination proteins [BR:hht03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     F506_10100
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      F506_10100
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB UVR ResIII DEAD AAA_30 Kinesin Phage_T4_Y10B P-loop_SecA FPRL1_inhibitor
Other DBs
NCBI-ProteinID: AKZ62973
UniProt: A0ABM5V0B6
LinkDB
Position
complement(2230544..2232637)
AA seq 697 aa
MADLSPVTAASSTLDESKFLTFPDSPYRLYQPFPPAGDQPAAIEKLVEGVHDGLFFQTLL
GVTGSGKTYTMANAIARLGRPAIIFAPNKTLAAQLYSEFREFFPQNAVEYFVSYYDYYQP
EAYVPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHQMI
LTLRAKDKVSQRDVIARLIQMQYSRNEVDFGRGTFRVRGDTIDVFPAEHAELAVRIEMFD
DEIDSLQLFDPLTGRVRQKIPRFTVYPGSHYVTPRATVLRAIETIKDELRERLEFFRKEN
KLIEEQRLEQRTRFDIEMMTEIGFTKGIENYSRHLSGAKAGDPPPTLVDYLPADAIMFLD
ESHVLIGQLNGMYNGDRARKTNLVDYGFRLPSALDNRPLKFDEFQGKMRQTIFVSATPAE
YENTHSDQVVEQVVRPTGLVDPLISVRPATTQVDDLMQEITMRVKKNERVLVTTLTKRMS
EQLTEFLSDNGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVA
ILDADKEGFLRSERSLIQTIGRAARNLNGMAILYGDKVTDSMQKAIGETERRRAKQLAFN
EANGITPMGIKKEIRELIDGVYSPQEARVELMVAQEQANYEAMSEKQVSKEIKRLEKLMQ
EHAKNLEFEKAAKVRDQLHQLKQQLFGAAGDDTVAVA
NT seq 2094 nt   +upstreamnt  +downstreamnt
atggctgatttatcccccgttactgcagcatcttctacgctcgacgagagcaagttcctg
acgttcccggattctccttaccgtctgtaccagcccttcccgcctgccggcgaccagccg
gccgcaatcgagaagctggtcgaaggggtgcatgacggcctgttcttccagaccctgctg
ggcgtcaccggttcgggcaagacctatacgatggccaacgccatcgcacgtctcggccgg
ccggcaatcatcttcgcgccgaacaaaacgctggcagcgcagctttacagcgaatttcgc
gagttctttccgcaaaatgcggtcgaatatttcgtcagctactacgattactaccagccg
gaagcctacgtcccgcagcgcgatctgttcatcgagaaagattcctcgatcaacgaacac
atcgaacagatgcgcctgtcgtgcaccaagtcgctgatggagcggcgtgacgttgtcatt
gtggcaaccgtctcggcgatttacggtatcggtaaccccaacgaataccaccagatgatc
ctgaccttgcgcgccaaggacaaggtcagccagcgcgacgtcatcgcgcgcctgatccag
atgcaatactcgcgcaacgaagtcgacttcggccgcggcaccttccgcgtgcgcggcgac
accattgacgtgttccccgccgagcatgccgaactggccgtgcgcatcgagatgttcgac
gatgaaatcgacagcctgcaattgttcgacccgctgaccggccgcgtgcgccagaagatt
ccgcgcttcaccgtttatcccggttcgcactacgtcaccccgcgtgcaacggtgctgcgc
gccatcgagacgatcaaggacgagttgcgcgaacggctggaattcttccgcaaggaaaac
aagctgatcgaagaacagcgccttgagcagcgcactcgtttcgacatcgaaatgatgacc
gagatcggcttcaccaagggcatcgaaaactattcgcgccacctgtccggcgccaaggcc
ggcgatccgccgccgacgctggtggattacctgccggcggatgcgatcatgttcctcgat
gagtcgcacgtgctgatcggccagctcaacggcatgtacaacggcgaccgcgcccgcaag
accaatctggtcgactacggcttccggctgccgtcggcgctggacaatcggccactcaag
ttcgacgagttccagggcaagatgcgccagaccattttcgtctcggccacgcccgccgaa
tatgaaaacacccattccgaccaggtggtcgagcaagtggtgcgtccgaccggcctggtc
gacccgctgatttccgtgcgtcctgcaacgacccaggtcgacgacctgatgcaggaaatc
accatgcgcgtgaagaagaacgagcgcgtgctggtgaccacgctgaccaagcgcatgtcg
gagcagctgactgaattcctcagcgacaacggcgtcaaggtgcgctatctgcacagcgac
atcgacaccgtcgaacgcgttgaaatcatccgcgacctgcgccttggcaccttcgacgtg
ctggtcggcatcaacctgctgcgcgaaggcctggatattcccgaagtctcgctggtggcg
attctcgacgccgacaaggaaggcttcctgcgttccgagcgcagcctgatccagaccatc
ggccgcgccgcgcgcaacctcaacggcatggcgatcctgtatggcgacaaggtcaccgac
tcgatgcagaaagccatcggcgaaaccgaacgccgccgggccaagcagcttgccttcaac
gaagccaacggcatcacgcctatgggcatcaagaaggaaatccgcgaactgatcgacggc
gtctacagcccgcaggaagcgcgcgtggaactgatggtggcgcaggaacaggccaactac
gaagccatgagcgaaaagcaggtcagcaaggaaatcaagcgcctcgaaaagctcatgcag
gagcacgccaagaacctcgagttcgaaaaagccgccaaggtgcgcgaccagttgcaccag
ctcaagcagcaattgttcggcgcggccggcgacgatacggtggcggtggcgtaa

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