Herbaspirillum hiltneri: F506_10100
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Entry
F506_10100 CDS
T04039
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
hht
Herbaspirillum hiltneri
Pathway
hht03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F506_10100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hht03400
]
F506_10100
DNA repair and recombination proteins [BR:
hht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F506_10100
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F506_10100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_30
Kinesin
Phage_T4_Y10B
P-loop_SecA
FPRL1_inhibitor
Motif
Other DBs
NCBI-ProteinID:
AKZ62973
UniProt:
A0ABM5V0B6
LinkDB
All DBs
Position
complement(2230544..2232637)
Genome browser
AA seq
697 aa
AA seq
DB search
MADLSPVTAASSTLDESKFLTFPDSPYRLYQPFPPAGDQPAAIEKLVEGVHDGLFFQTLL
GVTGSGKTYTMANAIARLGRPAIIFAPNKTLAAQLYSEFREFFPQNAVEYFVSYYDYYQP
EAYVPQRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHQMI
LTLRAKDKVSQRDVIARLIQMQYSRNEVDFGRGTFRVRGDTIDVFPAEHAELAVRIEMFD
DEIDSLQLFDPLTGRVRQKIPRFTVYPGSHYVTPRATVLRAIETIKDELRERLEFFRKEN
KLIEEQRLEQRTRFDIEMMTEIGFTKGIENYSRHLSGAKAGDPPPTLVDYLPADAIMFLD
ESHVLIGQLNGMYNGDRARKTNLVDYGFRLPSALDNRPLKFDEFQGKMRQTIFVSATPAE
YENTHSDQVVEQVVRPTGLVDPLISVRPATTQVDDLMQEITMRVKKNERVLVTTLTKRMS
EQLTEFLSDNGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVA
ILDADKEGFLRSERSLIQTIGRAARNLNGMAILYGDKVTDSMQKAIGETERRRAKQLAFN
EANGITPMGIKKEIRELIDGVYSPQEARVELMVAQEQANYEAMSEKQVSKEIKRLEKLMQ
EHAKNLEFEKAAKVRDQLHQLKQQLFGAAGDDTVAVA
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttatcccccgttactgcagcatcttctacgctcgacgagagcaagttcctg
acgttcccggattctccttaccgtctgtaccagcccttcccgcctgccggcgaccagccg
gccgcaatcgagaagctggtcgaaggggtgcatgacggcctgttcttccagaccctgctg
ggcgtcaccggttcgggcaagacctatacgatggccaacgccatcgcacgtctcggccgg
ccggcaatcatcttcgcgccgaacaaaacgctggcagcgcagctttacagcgaatttcgc
gagttctttccgcaaaatgcggtcgaatatttcgtcagctactacgattactaccagccg
gaagcctacgtcccgcagcgcgatctgttcatcgagaaagattcctcgatcaacgaacac
atcgaacagatgcgcctgtcgtgcaccaagtcgctgatggagcggcgtgacgttgtcatt
gtggcaaccgtctcggcgatttacggtatcggtaaccccaacgaataccaccagatgatc
ctgaccttgcgcgccaaggacaaggtcagccagcgcgacgtcatcgcgcgcctgatccag
atgcaatactcgcgcaacgaagtcgacttcggccgcggcaccttccgcgtgcgcggcgac
accattgacgtgttccccgccgagcatgccgaactggccgtgcgcatcgagatgttcgac
gatgaaatcgacagcctgcaattgttcgacccgctgaccggccgcgtgcgccagaagatt
ccgcgcttcaccgtttatcccggttcgcactacgtcaccccgcgtgcaacggtgctgcgc
gccatcgagacgatcaaggacgagttgcgcgaacggctggaattcttccgcaaggaaaac
aagctgatcgaagaacagcgccttgagcagcgcactcgtttcgacatcgaaatgatgacc
gagatcggcttcaccaagggcatcgaaaactattcgcgccacctgtccggcgccaaggcc
ggcgatccgccgccgacgctggtggattacctgccggcggatgcgatcatgttcctcgat
gagtcgcacgtgctgatcggccagctcaacggcatgtacaacggcgaccgcgcccgcaag
accaatctggtcgactacggcttccggctgccgtcggcgctggacaatcggccactcaag
ttcgacgagttccagggcaagatgcgccagaccattttcgtctcggccacgcccgccgaa
tatgaaaacacccattccgaccaggtggtcgagcaagtggtgcgtccgaccggcctggtc
gacccgctgatttccgtgcgtcctgcaacgacccaggtcgacgacctgatgcaggaaatc
accatgcgcgtgaagaagaacgagcgcgtgctggtgaccacgctgaccaagcgcatgtcg
gagcagctgactgaattcctcagcgacaacggcgtcaaggtgcgctatctgcacagcgac
atcgacaccgtcgaacgcgttgaaatcatccgcgacctgcgccttggcaccttcgacgtg
ctggtcggcatcaacctgctgcgcgaaggcctggatattcccgaagtctcgctggtggcg
attctcgacgccgacaaggaaggcttcctgcgttccgagcgcagcctgatccagaccatc
ggccgcgccgcgcgcaacctcaacggcatggcgatcctgtatggcgacaaggtcaccgac
tcgatgcagaaagccatcggcgaaaccgaacgccgccgggccaagcagcttgccttcaac
gaagccaacggcatcacgcctatgggcatcaagaaggaaatccgcgaactgatcgacggc
gtctacagcccgcaggaagcgcgcgtggaactgatggtggcgcaggaacaggccaactac
gaagccatgagcgaaaagcaggtcagcaaggaaatcaagcgcctcgaaaagctcatgcag
gagcacgccaagaacctcgagttcgaaaaagccgccaaggtgcgcgaccagttgcaccag
ctcaagcagcaattgttcggcgcggccggcgacgatacggtggcggtggcgtaa
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