Herbaspirillum hiltneri: F506_11190
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Entry
F506_11190 CDS
T04039
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
hht
Herbaspirillum hiltneri
Pathway
hht02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F506_11190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
DUF4347
Big_3_2
Big_3_3
Big_5
Motif
Other DBs
NCBI-ProteinID:
AKZ63163
LinkDB
All DBs
Position
2457165..2462573
Genome browser
AA seq
1802 aa
AA seq
DB search
MNQLISSLRRAAADAAVAAVADTDKPAVRRPLRHASQLLSLEQRFMFDGAVADAAHAAQA
HDSAPPPVPPAVTVRAADPAKDEGKKEVVLVDTSVANYKSLEAGVRDGVGIVEFDGSKDG
LAQIAQWAATQNGLDAIHILSHGSEGVINLGTARLDEATLGTATTQAELAQLGQALTADG
DLLLYGCDVAAGDNNTLIADLAQVTGADVAASRDATGAAAIGGNWTLEAHAGKIDTKALD
IADYQGLLTLITLSGSDADYTSTTIVKQVNGQNITFSGGASAGGLGIDGTYGTDGLYAYQ
GPTNEVKLTITIGSGYSFDISSFDVGVLTGSLRIDFTYADNTTDTLTVNSLANGWQTVLN
SSLSKQINDVKQVVFSSGDFGLFQNFDITDVKAVLHPPTVTVNSASLSADTGTSSSDFIT
KTAAQTINGTLSTNLSTGEKVQVSYDNGSSWTDATSYTVGSSSWSTTTTLAGSSTFQARV
TNSDGSSTAYTHSYALDTTAPTTSFSGIALSADTGSSGSDFITKTAAQTITATLSTTLTA
GDVVYGSLDNGATWTDITSKVSGTTLTWNGATLGAGSSSIAFKVTDAAGNDSSLSSHSYT
LDTTAPTTTVATAAFSNDSGTSSSDFVTNTAAQDLSGTLSANLAVGETVLVSLDNGSTWT
TATTTVGQNTWSLAGRTLTASNTLKVKVSDTAGNDGSVLSQAYVYDTTAPTIAFNSLALS
ADTGGSNSDFITKTAAQTITATLSTTLAAGDIVYGSLDNGATWTDITSKVSGTALSWNGV
TLTGSSTLQLRVVDAAGNSGSAKTQAYTLDTSTPATPGTPVLAGASDTGASGSDGVTSDT
TPTLSGTAENGSTVTVFDGATLLGTVTAGAGGWTLTTGALAEGNHTITAVSTDAAGNATA
ASAALTINIDSTAPTVASVAVPANGTYYNGNPLDFTVNFDEAVTVDTTGGTPRIALVVGA
TTRYASYVSGSGTSALVFRYTVPGGDVDANGITVGALSLNGGTLRDTAGNNAATTLNSVG
STAGINVDGTSPSVTGISATTADGSYAAGQTITITVGFSTAVDVDTSGGTPTLTLDNGGV
ASYAGGSGSSTLTFTYVVAAGQNSADLDYGSTAALAFNAATITDAGGSHRPADLTLATPG
TAGSLGANKNIVVDTTAPTNTVAGASFSSDTGSSSTDFITKTAAQTISGTLASNRAADEQ
VYVSLDNGATWTLATSSAGANTWSLAGQTLSGSGTLKVRVSDNAGNNGTAYSQAYVLDTT
APTTSFSGIALSADTGASNSDLITNTAAQTISATLSSAPAAGDIVYGSLDNGATWTDITS
KVSGTTLTWNGVTLAASNTLQLRVTDAAGNNGAATSRAYVLDTTAPTTSVASVAFSADSG
ASGSDFITRTAAQTVSGTLSSNLAAGESVLVSLDNGATWNTANATVGSNAWSLAGQTLNA
SNTLLVKVTDTAGNDGAVLSQAYVYDTAATVATVDTLQTDSSTPTLTGNATLAAGETMTV
TVGGATYNVVPVAGHWSLDLSTAVPASGVLALPTAHRYEVVATVTDIAGNTSSDVSSNEL
TVGTIATVAPSSPLPPPLPVQTQIPPPLAIQTGGEPASPGLPPNEASIAPILTPSVAWSS
PLMSGVFTLDSTTLSEPQALTSGRPDLIGNDGVLISNTPIPDLNVRNNGPISLQVPGDAF
SYGGNASSLQLNATLADGRPLPTWLKFDPSTGRFTGTPPLGFEGTLNFKVSARDSQGHVA
VQTFKIVVTKEGQNNQRAQLERGQQEPAGRPGLNEQIRSAHAAGADRLALLSRSPATTRL
RA
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagttgatttcttccctgcgtcgcgctgccgccgatgccgctgttgctgctgtt
gccgatactgataagccagccgtccgtcggccgctgcggcatgcatcgcaattgctgtcg
ctggaacaacgcttcatgtttgacggcgctgtcgccgacgcagcacacgccgcccaggcg
catgacagcgcgccgccgccagtgccgccggcagtcacggtgcgagccgccgatccggcc
aaggacgagggcaagaaagaggtggtactggtcgacacctccgtcgccaattacaagagc
ctggaagccggcgtccgcgatggcgtaggcatcgtcgagttcgacggcagcaaggacggc
ctggcgcagatcgcgcaatgggcggccacgcaaaacggactggatgcaatccacatcctc
tcgcatggctcggaaggtgtaatcaacctcggcacggcgcggttggatgaagcgacgctg
ggaaccgccaccacccaggctgaactggcgcaacttggccaggccctgaccgccgacggc
gacttgctgttgtacggctgcgatgtcgccgccggcgacaacaacacgctgatcgccgat
ctggcgcaggtcaccggcgccgatgtcgcggcgtcgcgcgacgccaccggcgcggcagcc
atcggcggcaactggacgctcgaagcgcatgccggcaagatcgacaccaaagcgctcgac
atcgccgactatcagggcctgctcaccttgattaccttgtccggcagcgacgccgactac
acctcgaccaccatcgtcaagcaggtcaacggccagaacatcacgttttccggcggcgcc
agcgccggcggcctgggcattgacggcacctatggcacggacgggttgtacgcctatcaa
ggcccgaccaatgaagtcaaactgacgatcacaatcggttccggctacagcttcgacatc
agctcgttcgatgtcggcgtcctgaccggctcgctgaggatagactttacgtatgccgac
aatacaaccgacacgctgacagtcaactcgctggccaacggctggcagaccgtgctcaat
tccagcctgagcaaacagatcaacgacgtcaagcaggtggtgttcagttccggcgatttc
gggctgttccagaatttcgacatcactgacgtcaaggctgtgctgcacccgcccacggtc
acggtcaacagcgccagcctgtcggccgacaccggcaccagcagcagcgacttcatcacc
aagaccgccgcgcaaaccatcaacggcacgctgtcgaccaacctgagcacgggcgaaaag
gttcaagtgtcgtatgacaacggcagcagctggaccgatgccaccagctacacggtcggc
tccagcagctggagcaccaccaccacgctggccggcagcagcaccttccaggcgcgcgtc
accaatagcgacggctccagcaccgcctacacgcacagctacgcgctggacaccacggcg
cccaccaccagcttcagcggcatcgcgctgtcagccgacaccggcagcagcggcagcgac
ttcatcaccaagactgcggcccagaccatcacggccaccctgagcacaacgctgaccgcc
ggtgatgtcgtctacggctctctggataacggcgccacctggaccgacatcaccagcaag
gtgtccggcaccacgctgacctggaacggcgccaccctgggcgccggcagcagctccatc
gcgttcaaggtgaccgacgcagccggcaacgacagcagcctgagctcccatagctatacg
ctggacaccaccgcgcccaccaccactgtggccacggcggccttctccaacgacagcggc
acctcgtcgtccgacttcgtcaccaatacggcggcgcaggacctgagcggcacgctgtcg
gccaacctggccgtcggcgagacggtgctggtatcgctcgacaacggttcgacctggacc
accgccaccaccaccgtgggccagaacacctggtcgctggccgggcgcacgctcaccgcc
agcaacaccctcaaggtcaaggtcagcgacaccgccggcaacgacggcagcgtattgagc
caggcctacgtctacgacaccacggcgccgaccatcgccttcaacagcctggcgctgtcg
gccgacaccggcggcagcaacagcgacttcatcaccaagactgcggcccagaccatcacg
gccaccctgagcaccacactggccgccggcgacatcgtctacggttcgctggacaacggc
gccacctggaccgacatcaccagcaaggtcagcggcaccgccctgagctggaacggcgtc
acgctgaccggcagcagcacgttgcagctaagggtcgtcgacgccgccggcaacagcggc
agcgccaagacccaggcctacacgctcgacaccagcaccccggccacgcccggcacgccg
gtgctggcaggagccagcgacacgggcgcctccggcagcgacggcgtgaccagcgacacc
acgccgacactgagcggcacggccgagaacggcagcaccgtcaccgtgttcgacggggcc
acgctgctgggcaccgtcaccgccggcgccggcggctggaccctgaccaccggcgcgctg
gccgaaggcaaccacaccatcacggccgtctccacggacgccgccggcaacgccacggcc
gcttcggccgcgctgaccatcaacatcgactccaccgcgcccaccgtcgcctcggtggcc
gtgccggccaacggcacctactacaatggcaatccgctggacttcaccgtcaacttcgac
gaagccgtcaccgtcgacaccaccggcggcacgccgcgcatcgccctcgtggtcggcgcc
accacgcgctacgccagctatgtgtccggctccggcaccagtgcgctggtgttccgctac
accgtgcccggcggcgacgtcgatgccaacggcatcacggtcggcgcgctgtcgctcaac
ggcggcacgctgcgcgacaccgcaggcaacaacgccgcgaccaccctcaacagcgtcggc
agcacggccggcatcaatgtcgacggcaccagcccgagcgtgaccggcatcagcgccacc
actgcggacggcagctacgccgccggccagaccattaccatcacggtaggcttctccaca
gcggtggacgtcgacaccagcggcggcacgccgacgctgacgctcgacaacggcggcgtc
gccagctacgcgggcggctcgggcagcagcacgctgacgttcacctatgtggtcgccgcc
gggcagaacagcgccgacctcgactacggctcgaccgccgcgctggcgttcaacgctgcc
accatcaccgacgccggcggcagccaccggcctgccgacctcacgctggccacgccgggc
acggccggctcgctgggcgccaacaagaatatcgtcgtcgacaccaccgcgccgaccaac
accgtggctggcgccagcttctcgtccgacaccggcagttccagcaccgacttcatcacc
aagactgcggcgcaaaccatcagcggcacgctggcgtcaaaccgggcggccgacgagcag
gtctacgtgtcgctggacaacggcgccacctggacgctggcgaccagcagcgccggcgcc
aacacctggtcgctggccgggcagacgctgtccggcagcggcaccctgaaagtgcgcgtc
agcgacaacgcaggcaacaacggtaccgcctactcgcaggcctacgtgctcgataccacg
gcgcccaccaccagcttcagcggcatcgcgctgtcggccgacaccggtgccagcaacagc
gacctgatcactaacacggcggcgcagacaatctccgccacgctcagcagcgccccggcg
gccggcgacatcgtctacggctcgctggacaacggcgccacctggaccgacatcaccagc
aaggtgtccggcaccacgctgacctggaacggcgtcaccctggccgccagcaacacgctt
caactgcgcgtgacggacgccgccggcaacaacggcgccgccaccagccgggcctacgtg
ctcgacaccaccgccccgaccaccagcgtggccagcgtggccttctcggccgacagcggc
gcctccggcagcgacttcatcacccgtacggcggcgcaaacggtaagcggcaccctgtcc
tccaacctggcggccggcgaatcagtgctggtctcgctcgacaacggcgctacctggaac
accgccaacgccactgtcggcagcaatgcctggtcgctggccggccagaccctcaacgcc
agcaacaccctgctggtcaaggtgaccgacaccgccggcaacgacggcgccgtgctcagc
caggcctacgtctacgatactgcggccacggtagcgaccgtcgacacgctgcagaccgac
agcagcacacccacgttgaccggtaatgccaccctggccgcaggggaaaccatgacggtc
actgtcggcggcgctacgtataatgtcgttccggtagcagggcattggagccttgatctg
tccacggccgtcccggcgagcggtgttttggcgctgcctacggcgcatcgttacgaggtg
gtggcaaccgtcaccgatatcgccggcaacacgtccagcgacgtcagcagcaacgaactc
acggtcggaacgattgcaaccgttgcgccatcgtcgccgctaccgcctccgctgccggtg
caaacgcaaatcccgccgcctctcgccatacagaccggaggagaaccggcgtctcccgga
ctgcctccaaacgaggcaagcatcgcgcccatcctcacgccttccgtcgcctggagcagt
ccgttgatgtccggcgtcttcacgcttgattcgactacgttgtccgaacctcaggcgctg
accagcggccgcccggatctgattggcaacgatggcgtcctgatcagcaatacgcctatt
cccgacctgaacgtacgcaataatggtcctatctctcttcaggtgcccggcgatgccttc
tcctacggcggaaatgcaagcagcctgcagttgaacgcgaccctggcggacggcaggccg
ttgccgacctggctcaagttcgatccctccactggccggttcacaggtacgccacccctc
ggatttgaaggtacgctgaatttcaaggtcagtgcgcgcgacagccagggccacgtcgcg
gtacagacgttcaagatcgtcgtcaccaaagagggacaaaacaaccagcgcgcgcagctt
gagcgcggccagcaggaaccggcgggacgtcccggcctgaacgaacaaatcagatcggcg
catgcggcgggagccgatcgcctggccctgttgtcgcgtagtccggcgacgacgcgattg
cgtgcatga
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integrated database retrieval system
