Herbaspirillum hiltneri: F506_12175
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Entry
F506_12175 CDS
T04039
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hht
Herbaspirillum hiltneri
Pathway
hht00061
Fatty acid biosynthesis
hht00071
Fatty acid degradation
hht01100
Metabolic pathways
hht01212
Fatty acid metabolism
hht02024
Quorum sensing
hht04146
Peroxisome
Module
hht_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
F506_12175
00071 Fatty acid degradation
F506_12175
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
F506_12175
09145 Cellular community - prokaryotes
02024 Quorum sensing
F506_12175
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hht01004
]
F506_12175
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hht04147
]
F506_12175
Enzymes [BR:
hht01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
F506_12175
Lipid biosynthesis proteins [BR:
hht01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
F506_12175
Exosome [BR:
hht04147
]
Exosomal proteins
Exosomal proteins of breast milk
F506_12175
Exosomal proteins of breast cancer cells
F506_12175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
GH3
Motif
Other DBs
NCBI-ProteinID:
AKZ63326
LinkDB
All DBs
Position
2674165..2676138
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AA seq
657 aa
AA seq
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MVETTQRPGAQTFPQLLLMHAKARPDRPAFREKDLGIWQTTTWAQVADEVRAFACGLAAL
GFKRGMSLAIIGNNCPRLYWAMSATQCLGGMPVPLYQDAPAADMSYVLNDAEIDFVVAED
QEQVDKVFEIKLSFSGGTERPTHIIYDDERGMRNYRQPELSSFASVQELGRAYDKANPTF
FMDQINALTSDDIAIILYTSGTTGKPKGVCHSHAAMIATAQTLVDFDQLNEKDDVLCYLP
LAWVGDFLYSFAQTHVAGFCLNCPESPSTVMTDLREIGPTYYFAPPRIYENILTQVMIRI
EDAGWVKRQLFHGFMKIARRVGMRILDKKPDVSLSDRLLYAIGHLVIYGPLKNVLGMSRI
RVAYTGGEAIGPDLFDFYRSLGINLKQLYGMTETCVTVCMQPSGDVKLDTVGRPMRGVEV
HIDASGEVLVRSPGLMKSYFKRPDATAEAIDENGYFHTGDAGFFDSDGHLKIIDRAKDVG
KMACGTMFAPKYIENKLKFFPFIKEAVVFGNQREQCTAFINIDMDAVGNWAERRNLAYSG
YTDLAAHESVYALVADCVEKVNADLVQDPLLADSQVHRFLVLHKELDPDDDELTRTRKVR
RGFIAEKYAVLIDALYAGKQSQYIETQVKFEDGRQGMIAADLRIADVKTFANLNQAA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggtggagacaacacaacgtccaggagcgcagacatttccgcagctgctcctgatgcat
gcaaaggcgcgtccggatcgcccggcgttccgcgaaaaggatctcggcatttggcaaacc
acgacgtgggcccaggtggcggacgaggtgagggcgttcgcctgcggcctggcggcgctc
ggtttcaagcgcggcatgagcctggcgatcatcggcaacaattgcccgcggctgtattgg
gcgatgtccgccacgcaatgcctgggcggcatgcctgtgccactgtaccaggatgcgccg
gccgccgacatgtcttatgtgctcaatgacgccgagatcgatttcgtcgtcgccgaagac
caggagcaggtcgacaaggtcttcgagatcaagctgagcttctccggcggcaccgagcgt
ccgacccacatcatctatgacgacgaacgcggcatgcgtaattatcgccagcccgagctg
tcgtcattcgccagcgtgcaggaactgggtcgcgcctacgacaaggccaatccgaccttc
ttcatggatcagatcaacgcgctgaccagcgacgacatcgccatcatcctgtatacctcc
ggcaccaccggcaagcccaagggcgtgtgccattcgcatgcggcaatgatcgcgacggcg
cagacactggtcgatttcgaccagttgaacgagaaggacgacgtgctgtgctacctgccg
ctggcctgggtgggcgacttcctgtattcgttcgcacagactcacgtggccggcttctgc
ctcaattgcccggaatcgccgagtacggtcatgaccgacctgcgcgaaatcggaccgacg
tattatttcgcaccgccgcgcatctatgaaaacatccttacgcaagtgatgatccgcatc
gaggacgcgggctgggtcaagcgccaactgttccacggcttcatgaagatcgctcgccgt
gtcggcatgcgcatcctcgacaagaagccggacgtctcgctgtccgaccgcctgctctac
gccatcggccacctggtcatctacggtccgctcaagaacgtgctgggcatgtcgcgcatc
cgcgtggcctacaccggcggcgaagcgatcggtcctgacctgttcgacttctatcgctcg
ctcggcatcaacctcaagcagctgtacggcatgaccgaaacctgcgtcacggtctgcatg
cagccctccggcgacgtcaagctcgacaccgtgggccggccgatgcgcggcgtcgaagtc
cacatcgacgccagcggtgaagtgctggtgcgctcgccgggattgatgaagtcctacttc
aagcgccctgacgccaccgccgaagcgatcgatgaaaacggctacttccacaccggcgat
gccggcttcttcgacagcgacggccacctgaagatcatcgaccgcgccaaggatgtcggc
aagatggcctgcggcacgatgttcgcgcccaagtacatcgagaacaagctgaagttcttc
cccttcatcaaggaagccgtggtgttcggcaaccagcgcgagcaatgcacggccttcatc
aacatcgacatggacgccgtcggcaactgggccgagcgccgcaacttggcgtatagcggc
tatacggacctggcggcgcacgagagcgtgtatgcgctggtggccgattgcgtggaaaag
gtcaatgccgacctggtgcaggatcccttgctggccgactcgcaggtgcatcgcttcctg
gtgctgcacaaggaactggatcccgatgacgacgagctgacgcgcacacgcaaggtgcgg
cgcggtttcatcgccgaaaaatatgcggtgctgatcgatgcgctgtacgcaggcaagcag
tcgcagtacatcgagacgcaggtgaaattcgaagacggtcgccagggcatgattgcggcc
gacctcaggattgccgacgtcaagactttcgccaacctcaaccaagcggcatag
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