Herbaspirillum hiltneri: F506_13195
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Entry
F506_13195 CDS
T04039
Name
(GenBank) glycogen debranching protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
hht
Herbaspirillum hiltneri
Pathway
hht00500
Starch and sucrose metabolism
hht01100
Metabolic pathways
hht01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hht00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
F506_13195
Enzymes [BR:
hht01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
F506_13195
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
AKZ63499
LinkDB
All DBs
Position
complement(2907934..2910072)
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AA seq
712 aa
AA seq
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MTLVTPRHLQAGSPYPLGAHFDGLGINFAVFSGNATKIELCIFDATGRREVERLTLPECT
DEVWHGYLPDTSPGLVYGYRAYGPYEPQKGHRFNPNKLLLDPYARQLVGQVRWTDALFGY
RMHSAKGDLSFDRRDSAAAMPKAVVNEDMPVGKKFPRPRVPWSKTVIYEAHVRGISMMRD
GVMPHERGTFAALGHPDFIAHLQKLGVTTVELMPVHAFLQENFLLQRDLRNYWGYSTLGF
FAPEPNYLSTGDLNELRMAVRHFHAAGIEVILDVVYNHTCSGSELGPTLSMRGLDNANYY
RLLPGEERYYINDTGCGNTVNMSHPRVIQLVLDSLRYWAEAFDIDGFRFDLCTTLGREPT
GFDPGSGFFDALMQDPVLSQLKLIAEPWDIGPGGYQLGNHPPRFAEWNDKFRDAVRHFWA
GGEGLRGEFAGRMLGSSDLFDHHHRKPWSSVNFIASHDGFTLRDLVSYETKHNEANGENG
NDGHNENYSANWGVEGPTDDPEILQLRATVQRSMLTCVFLGQGTPMLLAGDEFHRTQRGN
NNAYCQDNEISWVNWKDAATQEGQALISYVARLTAIRRDFPVLQGDRFLHGNTEIEPGLK
DVAWFDERATPISVEDWQNPVARALTLQCAGAGNVDAAGNEAGGPDIVLMFFNAGHEPIE
FSFPRAEDAHYLLIDSNISDGAVSREACTTASVEVAAHSVQVFANRPCREQS
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgactttagtaacaccgcgccatctgcaagcaggatcgccttatccgttgggagcccat
tttgacggactgggcatcaacttcgctgtcttctccggcaacgccaccaagatcgagctg
tgcatcttcgacgccaccggccggcgtgaagtcgagcgcctgaccttgccggaatgcacc
gatgaggtgtggcacggctatctgcccgacacctccccgggactggtctacggctatcgc
gcctacggtccgtatgagccgcagaaaggtcatcgtttcaatcccaacaaattgctgctc
gatccctatgcacgccagctggtcggccaggtgcgctggaccgatgcattattcggctat
cgcatgcactcggccaagggcgacctcagcttcgaccgccgcgacagcgccgccgccatg
cccaaggcggtggtcaacgaggatatgccggtcgggaagaaattcccgcggccgcgcgtg
ccgtggtccaagacggtcatctacgaagcgcacgtgcgcggtatttccatgatgcgcgac
ggcgtcatgccgcatgaacgcggcacttttgctgcgcttggccatcccgatttcatcgcc
catttgcaaaagctgggcgtgaccacggtggaactgatgccggtgcatgctttcctgcaa
gagaacttcctgctgcagcgcgacctgcgcaattactggggctacagcacgcttggcttc
tttgcgccggaaccgaactacctgtccaccggcgatctcaacgagctgcgcatggcggtg
cgccatttccacgcagccggtatcgaggtgatcctcgacgtggtctacaaccacacttgc
tcgggcagcgaacttgggccgacgctgagcatgcgcggtctcgacaacgctaattattac
cgtctcttgcctggcgaggagcggtattacatcaacgacaccggctgcggcaacaccgtc
aacatgtcgcacccgcgcgtgatccagctggtgctggattcgctgcgctattgggccgag
gccttcgatatcgacggcttccgttttgacctgtgcacgacgctgggccgagagccgacc
ggcttcgatccgggcagcggcttcttcgacgcgctgatgcaggatccggtgctgtcgcag
ctgaagctgatcgccgaaccgtgggatatcggtccgggtggctatcagctcggcaaccat
ccgcctcgcttcgccgaatggaacgacaaattccgcgacgccgtgcgtcacttctgggca
gggggcgagggcctgcgcggcgagttcgccggacgcatgctgggttcgtcggacctgttc
gatcatcatcaccgcaagccctggtcctcggtcaacttcatcgcttcgcacgacggcttc
accctgcgcgatctggtcagctatgagaccaagcacaacgaagccaacggcgaaaacggc
aatgacggccacaacgagaattacagcgccaactggggcgtggagggaccgaccgatgat
ccggaaatcctgcagctgcgcgccaccgtccagcgctccatgctgacctgcgtgtttctg
ggacaggggacgccgatgctgctggcgggcgatgaattccatcgcacccagcgcggcaac
aacaacgcctattgccaggataacgagatttcctgggtcaactggaaggatgccgctacc
caagaaggccaggcgctgatcagctatgtcgcacggctgacggcgatccgccgtgatttc
ccggtgctgcagggcgatcgcttcctgcacggcaacacggagatcgaacccggtctcaag
gatgtcgcctggttcgacgaacgcgccacaccgatctcggtcgaggactggcaaaacccg
gtggcgcgcgcgctgacgctgcaatgcgccggcgcgggcaatgtggatgcggcggggaac
gaggccgggggcccggacatcgtgctgatgttcttcaacgcgggacatgagccgatcgag
ttcagttttccgcgcgccgaggatgcgcactacctgctcatcgacagcaacatctccgac
ggcgccgtttccagggaagcctgtaccaccgccagcgttgaagtcgcggcgcatagcgtg
caggttttcgccaatcgtccatgccgggaacaatcatga
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